RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ZBTB38Q8NAP3 1195 aaPredicted RBP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 OR14A2Q96R54 314 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 NOL6Q9H6R4 1146 aaKnown RBP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 EHMT1Q9H9B1 1298 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 ZIM2Q9NZV7 527 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 ZNRF3Q9ULT6 936 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 OAZ3Q9UMX2 235 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 SLC12A7Q9Y666 1083 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 NPHP3-ACAD11A0A0J9YXS1 232 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 H0Y858 1186 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 PLD2O14939 933 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 AKAP10O43572 662 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 FAM153BP0C7A2 387 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 PAMP19021 973 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 PTMSP20962 102 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 RAPGEF1Q13905 1077 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 LRRFIP1Q32MZ4 808 aaKnown RBP3.93□□□□□ -1.78
KPNB1-208ENST00000580019 GFOD2Q3B7J2 385 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 FNDC3BQ53EP0 1204 aaKnown RBP3.93□□□□□ -1.78
KPNB1-208ENST00000580019 DCAF15Q66K64 600 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 GK5Q6ZS86 529 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 REXO1L1PQ8IX06 675 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 TCEAL8Q8IYN2 117 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 AHI1Q8N157 1196 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 IPO9Q96P70 1041 aaKnown RBP3.93□□□□□ -1.78
KPNB1-208ENST00000580019 CAMKK2Q96RR4 588 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 SPATA9Q9BWV2 254 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 ASPSCR1Q9BZE9 553 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 CASS4Q9NQ75 786 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 TLR9Q9NR96 1032 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 CHST12Q9NRB3 414 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 SLC5A4Q9NY91 659 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 DTLQ9NZJ0 730 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 MARCH2Q9P0N8 246 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 FBXO9Q9UK97 447 aaPredicted RBP3.93□□□□□ -1.78
KPNB1-208ENST00000580019 SPEF1Q9Y4P9 236 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 PDS5BQ9NTI5 1447 aa3.93□□□□□ -1.78
KPNB1-208ENST00000580019 MRC2Q9UBG0 1479 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 GSG1L2A8MUP6 293 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 KATNA1O75449 491 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 CHGBP05060 677 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 U2AF1L5P0DN76 240 aaPredicted RBP3.92□□□□□ -1.78
KPNB1-208ENST00000580019 ITGA4P13612 1032 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 MAN1A1P33908 653 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 U2AF1Q01081 240 aaKnown RBP eCLIP3.92□□□□□ -1.78
KPNB1-208ENST00000580019 ITKQ08881 620 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 PIN1Q13526 163 aaPredicted RBP3.92□□□□□ -1.78
KPNB1-208ENST00000580019 NCAPHQ15003 741 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 MLC1Q15049 377 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 STRIP1Q5VSL9 837 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 RNF219Q5W0B1 726 aaPredicted RBP3.92□□□□□ -1.78
KPNB1-208ENST00000580019 NXNQ6DKJ4 435 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 TEPPQ6URK8 271 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 C6orf15Q6UXA7 325 aaPredicted RBP3.92□□□□□ -1.78
KPNB1-208ENST00000580019 PCGF5Q86SE9 256 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 TMPRSS6Q8IU80 811 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 AMOTL1Q8IY63 956 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 IFNL3Q8IZI9 196 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 AFAP1L2Q8N4X5 818 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 GPATCH11Q8N954 259 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 CHMP4CQ96CF2 233 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 SLC9A7Q96T83 725 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 TM9SF2Q99805 663 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 CDH19Q9H159 772 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 EPN3Q9H201 632 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 AASDHPPTQ9NRN7 309 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 DIS3Q9Y2L1 958 aaKnown RBP3.92□□□□□ -1.78
KPNB1-208ENST00000580019 ERCC6L2Q5T890 1561 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 LAMC3Q9Y6N6 1575 aa3.92□□□□□ -1.78
KPNB1-208ENST00000580019 PHLDB1Q86UU1 1377 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 WDR62O43379 1518 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 A0A087WZG4 1122 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 A0A1W2PQH9 124 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 STXBP3O00186 592 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 TBX3O15119 743 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 EYA4O95677 639 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 THBDP07204 575 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 IFIT2P09913 472 aaKnown RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 CD247P20963 164 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 BDNFP23560 247 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 GJA4P35212 333 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 PMS1P54277 932 aaKnown RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 CLCQ05315 142 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 LMOD3Q0VAK6 560 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 USP10Q14694 798 aaKnown RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 C10orf62Q5T681 223 aaPredicted RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 FAM102BQ5T8I3 360 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 CNNM4Q6P4Q7 775 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 ZBTB46Q86UZ6 589 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 DGKHQ86XP1 1220 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 C9orf106Q8NAJ2 232 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 WDR66Q8TBY9 1149 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 MCMBPQ9BTE3 642 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 TMX4Q9H1E5 349 aaPredicted RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 NCOA5Q9HCD5 579 aaKnown RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 INTS7Q9NVH2 962 aaKnown RBP3.91□□□□□ -1.78
KPNB1-208ENST00000580019 GIT1Q9Y2X7 761 aa3.91□□□□□ -1.78
KPNB1-208ENST00000580019 DISP3Q9P2K9 1392 aa3.9□□□□□ -1.78
KPNB1-208ENST00000580019 C2orf71A6NGG8 1288 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms