RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RPTORQ8N122 1335 aa4.39□□□□□ -1.71
SMARCE1-215ENST00000578995 MKI67P46013 3256 aaKnown RBP4.39□□□□□ -1.71
SMARCE1-215ENST00000578995 DNAH12Q6ZR08 3092 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PNMA6FA0A0J9YX94 578 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 ESYT2A0FGR8 921 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 SLC15A5A6NIM6 579 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 MEIS2O14770 477 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CYP26A1O43174 497 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 ADCY6O43306 1168 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PRPF3O43395 683 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 JAK2O60674 1132 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 SLC25A27O95847 323 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 EDNRBP24530 442 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 MAPK4P31152 587 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 KIF5BP33176 963 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PSMC4P43686 418 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 METAP2P50579 478 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CCT2P78371 535 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PPP2R5BQ15173 497 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CCL14Q16627 93 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PFKFB3Q16875 520 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 DUOXA2Q1HG44 320 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 TKFCQ3LXA3 575 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 MAP3K21Q5TCX8 1036 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 ANKRD34AQ69YU3 496 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 SNRNP48Q6IEG0 339 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CCDC174Q6PII3 467 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 LCNL1Q6ZST4 164 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PLEKHH3Q7Z736 793 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 ATG4DQ86TL0 474 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 FBXL6Q8N531 539 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 BANK1Q8NDB2 785 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 RGS22Q8NE09 1264 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 TRPV1Q8NER1 839 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CHST13Q8NET6 341 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CTCFLQ8NI51 663 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 NUP133Q8WUM0 1156 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 TRIB2Q92519 343 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PHKBQ93100 1093 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 SNX21Q969T3 373 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 COA7Q96BR5 231 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 ERO1AQ96HE7 468 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 TMX3Q96JJ7 454 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 LZTS2Q9BRK4 669 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 RNF26Q9BY78 433 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 MAF1Q9H063 256 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 MROH8Q9H579 483 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 GJB4Q9NTQ9 266 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 RNF146Q9NTX7 359 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 RBM28Q9NW13 759 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 CYP39A1Q9NYL5 469 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 LMCD1Q9NZU5 365 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 NOD1Q9Y239 953 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PTPN22Q9Y2R2 807 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PTCH2Q9Y6C5 1203 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 DDX49Q9Y6V7 483 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 GBF1Q92538 1859 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 ABCB11O95342 1321 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
SMARCE1-215ENST00000578995 PTPDC1A2A3K4 754 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 PIK3CDO00329 1044 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 TNPO2O14787 897 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 RAD21O60216 631 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ZBED4O75132 1171 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 SNAI1O95863 264 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 PGK2P07205 417 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ZSCAN22P10073 491 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 XRCC5P13010 732 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ALAS1P13196 640 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 SCG2P13521 617 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 TARSP26639 723 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ADORA2AP29274 412 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 COPB2P35606 906 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 FLT3LGP49771 235 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 GNAQP50148 359 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 FCGRTP55899 365 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 CNTN2Q02246 1040 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 MESP2Q0VG99 397 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 STK3Q13188 491 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ANKRD1Q15327 319 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 EML3Q32P44 896 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 COL13A1Q5TAT6 717 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 MAMDC4Q6UXC1 1216 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 CTU1Q7Z7A3 348 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 HOMER1Q86YM7 354 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 C1QL4Q86Z23 238 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 LRRC56Q8IYG6 542 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ALDH16A1Q8IZ83 802 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 IL27Q8NEV9 243 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 IL31RAQ8NI17 732 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 SYTL5Q8TDW5 730 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 SOCS4Q8WXH5 440 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ARMC5Q96C12 935 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 IFT43Q96FT9 208 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 MAML3Q96JK9 1138 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 APBA2Q99767 749 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 AMNQ9BXJ7 453 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 ZMYND12Q9H0C1 365 aa4.37□□□□□ -1.71
SMARCE1-215ENST00000578995 KDM4CQ9H3R0 1056 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms