RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 N4BP1O75113 896 aaKnown RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 CCDC172P0C7W6 258 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 YBX3P16989 372 aaKnown RBP eCLIP12.21□□□□□ -0.454e-8■□□□□ 8.4
SKA2-204ENST00000578519 FKBP1BP68106 108 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 CCNA1P78396 465 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 PPP2R5AQ15172 486 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 XKR3Q5GH77 459 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 RAD9BQ6WBX8 426 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 GBP6Q6ZN66 633 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 TOGARAM2Q6ZUX3 1019 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 KIAA1328Q86T90 577 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 TMEM174Q8WUU8 243 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 ERO1AQ96HE7 468 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 IFT74Q96LB3 600 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 EIF3CQ99613 913 aaKnown RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 TTYH3Q9C0H2 523 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 PLCB1Q9NQ66 1216 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 NRBP2Q9NSY0 501 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 PLAGL2Q9UPG8 496 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 SIK3Q9Y2K2 1263 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 BZW2Q9Y6E2 419 aaKnown RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 SSU72P8A0A1W2PR75 194 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 RSPH10B2B2RC85 870 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 K7ENM7 598 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 MAPK13O15264 365 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 DGAT1O75907 488 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 RSPH10BP0C881 870 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 ALDH5A1P51649 535 aaPredicted RBP12.2□□□□□ -0.46
SKA2-204ENST00000578519 HERVK_113P62684 666 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
SKA2-204ENST00000578519 KCTD2Q14681 263 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 SLC9C1Q4G0N8 1177 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 SFMBT2Q5VUG0 894 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 TCERG1LQ5VWI1 586 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 C12orf56Q8IXR9 622 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 FAM186BQ8IYM0 893 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 SHCBP1Q8NEM2 672 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 CEP170P1Q96L14 293 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 ASCC2Q9H1I8 757 aaPredicted RBP12.2□□□□□ -0.46
SKA2-204ENST00000578519 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
SKA2-204ENST00000578519 LOXHD1Q8IVV2 1947 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 SFI1A8K8P3 1242 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 BACH1O14867 736 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 ATP9AO75110 1047 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 URI1O94763 535 aaPredicted RBP12.19□□□□□ -0.46
SKA2-204ENST00000578519 SUPT20HL2P0C7V6 817 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 KCNA2P16389 499 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 ANXA13P27216 316 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 NMT1P30419 496 aaKnown RBP12.19□□□□□ -0.46
SKA2-204ENST00000578519 RTP1P59025 263 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 EXOC3L4Q17RC7 722 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 FAM102BQ5T8I3 360 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 PDXDC1Q6P996 788 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 MNS1Q8NEH6 495 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 EEF2KMTQ96G04 330 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 LSM14BQ9BX40 385 aaKnown RBP12.19□□□□□ -0.46
SKA2-204ENST00000578519 NHEJ1Q9H9Q4 299 aaPredicted RBP12.19□□□□□ -0.46
SKA2-204ENST00000578519 FAM207AQ9NSI2 230 aaPredicted RBP12.19□□□□□ -0.46
SKA2-204ENST00000578519 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 FZD1Q9UP38 647 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 SBF1O95248 1867 aa12.19□□□□□ -0.46
SKA2-204ENST00000578519 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
SKA2-204ENST00000578519 CTAGE9A4FU28 777 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 ASB14A6NK59 587 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 KIAA0391O15091 583 aaKnown RBP12.18□□□□□ -0.46
SKA2-204ENST00000578519 P4HA2O15460 535 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 CTIFO43310 598 aaKnown RBP12.18□□□□□ -0.46
SKA2-204ENST00000578519 AKR1B10O60218 316 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 EXOC3O60645 756 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 SERPING1P05155 500 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 CETPP11597 493 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 RFX1P22670 979 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 CASP5P51878 434 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 GTF2A2P52657 109 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 ACTR2P61160 394 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 ERVK-24P63145 666 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 GTF2BQ00403 316 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 KIF5AQ12840 1032 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 C10orf76Q5T2E6 689 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 LDLRAD1Q5T700 205 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 SWSAP1Q6NVH7 229 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 TRIM65Q6PJ69 517 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 ABHD15Q6UXT9 468 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms