RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 MYMKA6NI61 221 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 STAM2O75886 525 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 ARIH2O95376 493 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 CA3P07451 260 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 ICAM3P32942 547 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 NLRP12P59046 1061 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 UGCGQ16739 394 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 GNPTABQ3T906 1256 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 WDR81Q562E7 1941 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 IER5LQ5T953 404 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 HAUS3Q68CZ6 603 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 ARMCX2Q7L311 632 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 TPH2Q8IWU9 490 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 ELOA2Q8IYF1 753 aaPredicted RBP11.22□□□□□ -0.61
CRLF3-202ENST00000577725 LARP4BQ92615 738 aaKnown RBP11.22□□□□□ -0.61
CRLF3-202ENST00000577725 DCHS1Q96JQ0 3298 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 POLR3CQ9BUI4 534 aaPredicted RBP11.22□□□□□ -0.61
CRLF3-202ENST00000577725 UBE2ZQ9H832 354 aaPredicted RBP11.22□□□□□ -0.61
CRLF3-202ENST00000577725 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 TBC1D22BQ9NU19 505 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 WRAP73Q9P2S5 460 aaPredicted RBP11.22□□□□□ -0.61
CRLF3-202ENST00000577725 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 B4DLN1 442 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 ZBTB39O15060 712 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 SLITRK3O94933 977 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 SMC2O95347 1197 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 PGK1P00558 417 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 IL9P15248 144 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
CRLF3-202ENST00000577725 RPA1P27694 616 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 ASIC1P78348 528 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
CRLF3-202ENST00000577725 LY6KQ17RY6 165 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 DPCR1Q3MIW9 517 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 PRAMEF19Q5SWL8 479 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
CRLF3-202ENST00000577725 SV2BQ7L1I2 683 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 GPBP1Q86WP2 473 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 ABRAQ8N0Z2 381 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.61
CRLF3-202ENST00000577725 MORC4Q8TE76 937 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 COPS5Q92905 334 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 LXNQ9BS40 222 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 TSEN34Q9BSV6 310 aaKnown RBP11.21□□□□□ -0.61
CRLF3-202ENST00000577725 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 CUEDC2Q9H467 287 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 TUFT1Q9NNX1 390 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 FAM86C1Q9NVL1 165 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 KBTBD4Q9NVX7 518 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 ANO10Q9NW15 660 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 SAMM50Q9Y512 469 aa11.21□□□□□ -0.61
CRLF3-202ENST00000577725 NFASCO94856 1347 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 ASB14A6NK59 587 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 SLC26A4O43511 780 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 STRNO43815 780 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 KLRC4O43908 158 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 GGPS1O95749 300 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 ATP2A2P16615 1042 aaKnown RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 BMP6P22004 513 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 SARSP49591 514 aaKnown RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 ACLYP53396 1101 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 KRT76Q01546 638 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 MORC3Q14149 939 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 TRMT1LQ7Z2T5 733 aaKnown RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 SMYD4Q8IYR2 804 aaPredicted RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 ARNTL2Q8WYA1 636 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 CCDC34Q96HJ3 373 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 CDHR1Q96JP9 859 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 MPHOSPH6Q99547 160 aaKnown RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 HSD17B14Q9BPX1 270 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 IRF2BPLQ9H1B7 796 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 MAGEF1Q9HAY2 307 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 CBX8Q9HC52 389 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 POLD4Q9HCU8 107 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 JPH1Q9HDC5 661 aaPredicted RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.2□□□□□ -0.62
CRLF3-202ENST00000577725 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
CRLF3-202ENST00000577725 MYO15AQ9UKN7 3530 aa11.19□□□□□ -0.62
CRLF3-202ENST00000577725 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
CRLF3-202ENST00000577725 TMEM150BA6NC51 233 aa11.19□□□□□ -0.62
CRLF3-202ENST00000577725 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
CRLF3-202ENST00000577725 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
CRLF3-202ENST00000577725 WDR64B1ANS9 1081 aa11.19□□□□□ -0.62
CRLF3-202ENST00000577725 MAFGO15525 162 aa11.19□□□□□ -0.62
CRLF3-202ENST00000577725 EYA4O95677 639 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms