RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MSRAQ9UJ68 235 aa3.41□□□□□ -1.86
COPS3-213ENST00000577210 ZFP69BQ9UJL9 534 aa3.41□□□□□ -1.86
COPS3-213ENST00000577210 VWA7Q9Y334 891 aa3.41□□□□□ -1.86
COPS3-213ENST00000577210 NUMBLQ9Y6R0 609 aa3.41□□□□□ -1.86
COPS3-213ENST00000577210 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 SHTN1A0MZ66 631 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 TGM5O43548 720 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 H2AFYO75367 372 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 PRPF6O94906 941 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 S100BP04271 92 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 PDGFRBP09619 1106 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 CCND1P24385 295 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 PTX3P26022 381 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 POLD1P28340 1107 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 MC3RP41968 323 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 SARSP49591 514 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 AFF3P51826 1226 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 EPHB1P54762 984 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 LINC00310P59036 64 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 MRPS9P82933 396 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 KLF1Q13351 362 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 SEC23AQ15436 765 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 FSCN1Q16658 493 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 SKOR2Q2VWA4 1001 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 ZMAT1Q5H9K5 638 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 TRMT10BQ6PF06 316 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 BORAQ6PGQ7 559 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 LIPIQ6XZB0 460 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 OTOP2Q7RTS6 562 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 KANSL1Q7Z3B3 1105 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 SAPCD2Q86UD0 394 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 PROSER1Q86XN7 944 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 FAM26EQ8N5C1 309 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 CNTD1Q8N815 330 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 CDYL2Q8N8U2 506 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 LINC01356Q8N9X3 169 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 FNIP1Q8TF40 1166 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 GFM2Q969S9 779 aaKnown RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 FOXRED1Q96CU9 486 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 TMEM168Q9H0V1 697 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 KCND1Q9NSA2 647 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 UCKL1Q9NWZ5 548 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 H2AFY2Q9P0M6 372 aaPredicted RBP3.4□□□□□ -1.87
COPS3-213ENST00000577210 TCEAL9Q9UHQ7 104 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 CROTQ9UKG9 612 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 ZBTB21Q9ULJ3 1066 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 WASHC2CQ9Y4E1 1318 aa3.4□□□□□ -1.87
COPS3-213ENST00000577210 A0A0G2JNJ9 132 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 TRIM75PA6NK02 468 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 RASSF10A6NK89 507 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 GOLGA8AA7E2F4 631 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 GOLGA8BA8MQT2 603 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 DAPK3O43293 454 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 NUAK1O60285 661 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 CYP1A1P04798 512 aaPredicted RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 ZNF28P17035 718 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 PI3P19957 117 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 POU3F3P20264 500 aaPredicted RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 ENPP1P22413 925 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 IL13P35225 146 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 LIMS1P48059 325 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 GLRBP48167 497 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 MEOX1P50221 254 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 ADAM9Q13443 819 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 SPIDRQ14159 915 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 SURF1Q15526 300 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 UGT8Q16880 541 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 ANO4Q32M45 955 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 ESRP1Q6NXG1 681 aaKnown RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 CXorf67Q86X51 503 aaPredicted RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 GLB1L2Q8IW92 636 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 SP8Q8IXZ3 490 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 TMEFF1Q8IYR6 380 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 KLHL36Q8N4N3 616 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 CLRN3Q8NCR9 226 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 OR14C36Q8NHC7 312 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 RTF1Q92541 710 aaKnown RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 DACT3Q96B18 629 aaPredicted RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 MTMR8Q96EF0 704 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 LCORQ96JN0 433 aaPredicted RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 TACO1Q9BSH4 297 aaKnown RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 CARD11Q9BXL7 1154 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 OSBPL6Q9BZF3 934 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 SLC13A1Q9BZW2 595 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 SAE1Q9UBE0 346 aaPredicted RBP3.39□□□□□ -1.87
COPS3-213ENST00000577210 Q9UFV3 132 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 DENND2AQ9ULE3 1009 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 WASF3Q9UPY6 502 aa3.39□□□□□ -1.87
COPS3-213ENST00000577210 PRKD3O94806 890 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 FSBPO95073 299 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 APOL3O95236 402 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 MPIG6BO95866 241 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 KNG1P01042 644 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 HMGCRP04035 888 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 RPLP2P05387 115 aaKnown RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 INHBBP09529 407 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 MC4RP32245 332 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ETV4P43268 484 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ID4P47928 161 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 CDKN1CP49918 316 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms