RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 MAGOHP61326 146 aaKnown RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 GABPAQ06546 454 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 LRRC14Q15048 493 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 QPCTQ16769 361 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 ABCB5Q2M3G0 1257 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 H2AFVQ71UI9 128 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 MAGOHBQ96A72 148 aaKnown RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 PCDHA2Q9Y5H9 948 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 CEP350Q5VT06 3117 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 EIF4E1BA6NMX2 242 aaKnown RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 EPB41P11171 864 aaKnown RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 LSP1P33241 339 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 NF2P35240 595 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 SLC35G2Q8TBE7 412 aa16.13■□□□□ 0.17
PRPF8-216ENST00000577001 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 CNOT8Q9UFF9 292 aaKnown RBP16.13■□□□□ 0.17
PRPF8-216ENST00000577001 PDE6BP35913 854 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
PRPF8-216ENST00000577001 CORO7P57737 925 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 LRCH2Q5VUJ6 765 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 BARGINQ6ZT62 677 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 LNX1Q8TBB1 728 aaPredicted RBP16.12■□□□□ 0.17
PRPF8-216ENST00000577001 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 INPP4AQ96PE3 977 aaPredicted RBP16.12■□□□□ 0.17
PRPF8-216ENST00000577001 CTTNBP2NLQ9P2B4 639 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 TCRBV7S2A1N4TA0A589 114 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 KIAA0754O94854 1291 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 TADA2BQ86TJ2 420 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 KIRREL3Q8IZU9 778 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 KRT35Q92764 455 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 MAGEF1Q9HAY2 307 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 UBE2TQ9NPD8 197 aaPredicted RBP16.12■□□□□ 0.17
PRPF8-216ENST00000577001 FAM198AQ9UFP1 575 aa16.12■□□□□ 0.17
PRPF8-216ENST00000577001 FOXN3O00409 490 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-216ENST00000577001 MAGEA9P43362 315 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 GBP6Q6ZN66 633 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 WDR18Q9BV38 432 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 NT5C3AQ9H0P0 336 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 WNK3Q9BYP7 1800 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 FGFR4P22455 802 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 UAP1Q16222 522 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-216ENST00000577001 ZFYVE27Q5T4F4 411 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 FAM178BQ8IXR5 827 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 AMNQ9BXJ7 453 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 CD248Q9HCU0 757 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 PIAS1O75925 651 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 MYCLP12524 364 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-216ENST00000577001 TNFAIP3P21580 790 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 TNNC1P63316 161 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 TNIP1Q15025 636 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 RINT1Q6NUQ1 792 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 SEPT14Q6ZU15 432 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 C18orf8Q96DM3 657 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 LBHD1Q9BQE6 289 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-216ENST00000577001 VIPAS39Q9H9C1 493 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 PNMA2Q9UL42 364 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 ASTN1O14525 1302 aa16.11■□□□□ 0.17
PRPF8-216ENST00000577001 TOM1O60784 492 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 FIGNQ5HY92 759 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 CTNNBL1Q8WYA6 563 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-216ENST00000577001 PI4K2AQ9BTU6 479 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 TOPORSQ9NS56 1045 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-216ENST00000577001 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-216ENST00000577001 CD2APQ9Y5K6 639 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 FRMD3A2A2Y4 597 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 TGFB1I1O43294 461 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 GAS7O60861 476 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
PRPF8-216ENST00000577001 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 DHX38Q92620 1227 aaKnown RBP16.1■□□□□ 0.17
PRPF8-216ENST00000577001 CCT8L2Q96SF2 557 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 LUC7LQ9NQ29 371 aaKnown RBP16.1■□□□□ 0.17
PRPF8-216ENST00000577001 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
PRPF8-216ENST00000577001 BBOX1O75936 387 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 STAT1P42224 750 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 PRAMEF18Q5VWM3 479 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 TBC1D22AQ8WUA7 517 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 CBWD1Q9BRT8 395 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 DBR1Q9UK59 544 aaKnown RBP16.09■□□□□ 0.17
PRPF8-216ENST00000577001 GOLGA8KD6RF30 607 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 NPEPPSP55786 919 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 MAP2K1Q02750 393 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-216ENST00000577001 E2F5Q15329 346 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
PRPF8-216ENST00000577001 SYDE2Q5VT97 1194 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 EMBQ6PCB8 327 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 ZNF668Q96K58 619 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-216ENST00000577001 PRR12Q9ULL5 1215 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 SSU72P8A0A1W2PR75 194 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-216ENST00000577001 K7ENM7 598 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 MYZAPP0CAP1 466 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 BMP3P12645 472 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms