RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SLMAPQ14BN4 828 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 ANKS1AQ92625 1134 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 RNF25Q96BH1 459 aaPredicted RBP19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 MTMR8Q96EF0 704 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 POLE2P56282 527 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 ARMC9Q7Z3E5 817 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 NCAPGQ9BPX3 1015 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 A0A0G2JND7 137 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 LRRD1A4D1F6 860 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 OPHN1O60890 802 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 MYBL2P10244 700 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 CCDC137Q6PK04 289 aaKnown RBP19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 DEPTORQ8TB45 409 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 CASKIN2Q8WXE0 1202 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 NACC1Q96RE7 527 aa19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 PRMT1Q99873 361 aaKnown RBP19.27■□□□□ 0.67
ATPAF1-214ENST00000576409 SPAG7O75391 227 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 RWDD2BP57060 319 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 PPP2R5CQ13362 524 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 DLGAP5Q15398 846 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 PDXDC2PQ6P474 469 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 HIPK4Q8NE63 616 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 RAB3IL1Q8TBN0 382 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 P3H4Q92791 437 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 CYFIP2Q96F07 1278 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 ALG13Q9NP73 1137 aaKnown RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 CNOT8Q9UFF9 292 aaKnown RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 PXDNQ92626 1479 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 SERPINB2P05120 415 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 ADCY2Q08462 1091 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 SMAD1Q15797 465 aaKnown RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 LARGE2Q8N3Y3 721 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 CYTH2Q99418 400 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 STXBP3O00186 592 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 GH2P01242 217 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 FAM153BP0C7A2 387 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 CHN1P15882 459 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 FAM153CQ494X1 144 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 DNAJC7Q99615 494 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 C7orf25Q9BPX7 421 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 DHX36Q9H2U1 1008 aaKnown RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 CXorf56Q9H5V9 222 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 FAM153AQ9UHL3 310 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 VWDEQ8N2E2 1590 aa19.26■□□□□ 0.67
ATPAF1-214ENST00000576409 WNT7AO00755 349 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 MSH2P43246 934 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 BASP1P80723 227 aaKnown RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 CCDC17Q96LX7 622 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SAYSD1Q9NPB0 183 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 RAB21Q9UL25 225 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 MAGED2Q9UNF1 606 aaPredicted RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 TCP11X1B4DZS4 312 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 EIF2AK2P19525 551 aaKnown RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SAT1P21673 171 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 MMGT1Q8N4V1 131 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 DYDC2Q96IM9 177 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SEC16BQ96JE7 1060 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 USH1CQ9Y6N9 552 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 PPIP5K2O43314 1243 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 GAP43P17677 238 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 DMP1Q13316 513 aaPredicted RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 LONRF1Q17RB8 773 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 ZC2HC1CQ53FD0 456 aaPredicted RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 PAPD7Q5XG87 772 aaKnown RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SEMA6BQ9H3T3 888 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 MRPL11Q9Y3B7 192 aaKnown RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SEC23AQ15436 765 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC30A5Q8TAD4 765 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 C9orf72Q96LT7 481 aa19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 G3BP2Q9UN86 482 aaKnown RBP19.25■□□□□ 0.67
ATPAF1-214ENST00000576409 SSU72P8A0A1W2PR75 194 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 ATMINO43313 823 aaPredicted RBP19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 MDM2Q00987 491 aaPredicted RBP19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 NEDD1Q8NHV4 660 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC35G2Q8TBE7 412 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 SREK1Q8WXA9 508 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 ERGIC2Q96RQ1 377 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 NOP53Q9NZM5 478 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 GJA3Q9Y6H8 435 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC37A4O43826 429 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 EVI5O60447 810 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 HSD17B3P37058 310 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 PIK3CAP42336 1068 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 OSTNP61366 133 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 PTGISQ16647 500 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 ARHGEF16Q5VV41 709 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 SAAL1Q96ER3 474 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 IWS1Q96ST2 819 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 CALN1Q9BXU9 219 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 TRIM59Q8IWR1 403 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 ARHGAP24Q8N264 748 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 METTL13Q8N6R0 699 aa19.24■□□□□ 0.67
ATPAF1-214ENST00000576409 MYCBPAPQ8TBZ2 947 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms