RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TECP42680 631 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 TMEM62Q0P6H9 643 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 PTGDRQ13258 359 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 CTTNQ14247 550 aaKnown RBP15.19■□□□□ 0.02
CIITA-210ENST00000575513 TMEM266Q2M3C6 531 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 Q7L0L9 218 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 ERMNQ8TAM6 284 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 SLC7A3Q8WY07 619 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 TOP1MTQ969P6 601 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 CEP170P1Q96L14 293 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 RAD9AQ99638 391 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 ADAMTS10Q9H324 1103 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
CIITA-210ENST00000575513 AGO3Q9H9G7 860 aaKnown RBP15.19■□□□□ 0.02
CIITA-210ENST00000575513 SUGCTQ9HAC7 445 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.19■□□□□ 0.02
CIITA-210ENST00000575513 PADI3Q9ULW8 664 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 AKT3Q9Y243 479 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 YBX2Q9Y2T7 364 aaKnown RBP15.19■□□□□ 0.02
CIITA-210ENST00000575513 PCDHB6Q9Y5E3 794 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.18■□□□□ 0.02
CIITA-210ENST00000575513 POTEMA6NI47 508 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 ENPP3O14638 875 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 TLL1O43897 1013 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 RPS6KA5O75582 802 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 VTNP04004 478 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
CIITA-210ENST00000575513 RPA1P27694 616 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 CD52P31358 61 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 CLCN3P51790 818 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 RABGGTBP53611 331 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 NLRP11P59045 1033 aaKnown RBP15.18■□□□□ 0.02
CIITA-210ENST00000575513 DEFB103AP81534 67 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 CYP4A11Q02928 519 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 PAK2Q13177 524 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.18■□□□□ 0.02
CIITA-210ENST00000575513 LRRC71Q8N4P6 559 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 ZBED2Q9BTP6 218 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
CIITA-210ENST00000575513 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 INSL6Q9Y581 213 aa15.18■□□□□ 0.02
CIITA-210ENST00000575513 TMEM150BA6NC51 233 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 SPATA31C1P0DKV0 1188 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 EIF4BP23588 611 aaKnown RBP15.17■□□□□ 0.02
CIITA-210ENST00000575513 GPC3P51654 580 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 NPEPPSP55786 919 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 HTRA4P83105 476 aaPredicted RBP15.17■□□□□ 0.02
CIITA-210ENST00000575513 KIZQ2M2Z5 673 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 ZNF410Q86VK4 478 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 CATSPER3Q86XQ3 398 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 IGSF22Q8N9C0 903 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 NACC1Q96RE7 527 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 NKX2-4Q9H2Z4 354 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
CIITA-210ENST00000575513 GINS2Q9Y248 185 aa15.17■□□□□ 0.02
CIITA-210ENST00000575513 ASAP2O43150 1006 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 DGAT1O75907 488 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 BMP15O95972 392 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 SYT1P21579 422 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 POLGP54098 1239 aaPredicted RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 NBR1Q14596 966 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 XKR9Q5GH70 373 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 ARL6IP4Q66PJ3 421 aaKnown RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 PLA2G4FQ68DD2 849 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 MYOCDQ8IZQ8 938 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 TMEM40Q8WWA1 233 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 TCP11Q8WWU5 503 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 GUCD1Q96NT3 240 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 CDX2Q99626 313 aaPredicted RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 INO80BQ9C086 356 aaPredicted RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 SUCLA2Q9P2R7 463 aaPredicted RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 LRWD1Q9UFC0 647 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 DBR1Q9UK59 544 aaKnown RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 STXBP5LQ9Y2K9 1186 aa15.16■□□□□ 0.02
CIITA-210ENST00000575513 NOC2LQ9Y3T9 749 aaKnown RBP15.16■□□□□ 0.02
CIITA-210ENST00000575513 ZBTB39O15060 712 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 CA3P07451 260 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 DARSP14868 501 aaKnown RBP15.15■□□□□ 0.02
CIITA-210ENST00000575513 MYOGP15173 224 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 DRP2Q13474 957 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 GRIN2CQ14957 1233 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 PPP2R2DQ66LE6 453 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 RTN4RL1Q86UN2 441 aaPredicted RBP15.15■□□□□ 0.02
CIITA-210ENST00000575513 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 KCTD17Q8N5Z5 321 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
CIITA-210ENST00000575513 OSMRQ99650 979 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 GCOM2Q9BZD3 368 aaPredicted RBP15.15■□□□□ 0.02
CIITA-210ENST00000575513 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 C1orf112Q9NSG2 853 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 WDR81Q562E7 1941 aa15.15■□□□□ 0.02
CIITA-210ENST00000575513 MED24O75448 989 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms