RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 BHMT2Q9H2M3 363 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 SLC12A6Q9UHW9 1150 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 TBCAO75347 108 aaKnown RBP16.16■□□□□ 0.18
ABR-228ENST00000574437 QRICH1Q2TAL8 776 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 EMC10Q5UCC4 262 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 TMC3Q7Z5M5 1100 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 CEP57Q86XR8 500 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SEC16BQ96JE7 1060 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SLC40A1Q9NP59 571 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 MYH4Q9Y623 1939 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 FAM196BA6NMK8 535 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 TRAPPC3O43617 180 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
ABR-228ENST00000574437 STAT1P42224 750 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SCNN1DP51172 638 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SPRED3Q2MJR0 410 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 USH1GQ495M9 461 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 HYIQ5T013 277 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 PPP1R18Q6NYC8 613 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 YTHDF3Q7Z739 585 aaKnown RBP16.16■□□□□ 0.18
ABR-228ENST00000574437 NT5DC3Q86UY8 548 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SYCE1Q8N0S2 351 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 NLGN1Q8N2Q7 840 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 ZNF622Q969S3 477 aaKnown RBP eCLIP16.16■□□□□ 0.18
ABR-228ENST00000574437 DDX4Q9NQI0 724 aaKnown RBP16.16■□□□□ 0.18
ABR-228ENST00000574437 MAST2Q6P0Q8 1798 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 ATXN2Q99700 1313 aaKnown RBP16.16■□□□□ 0.18
ABR-228ENST00000574437 CES2O00748 559 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 CLSTN1O94985 981 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 KRT13P13646 458 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 EPHA7Q15375 998 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SLC30A10Q6XR72 485 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 ERMNQ8TAM6 284 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 FMO2Q99518 471 aa16.16■□□□□ 0.18
ABR-228ENST00000574437 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 BTNL10A8MVZ5 291 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 EVI5O60447 810 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 SNHG28P0DPA3 235 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 TAL1P17542 331 aaPredicted RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 RPL13P26373 211 aaKnown RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 HOXD13P35453 343 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 GLG1Q92896 1179 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 SCLT1Q96NL6 688 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 PLTPP55058 493 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 ARHGAP44Q17R89 818 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 GPATCH4Q5T3I0 446 aaKnown RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 KSR1Q8IVT5 923 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 SLC35G2Q8TBE7 412 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 CTNNBL1Q8WYA6 563 aaPredicted RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 OSBPL7Q9BZF2 842 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 SLITRK6Q9H5Y7 841 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 HAUS2Q9NVX0 235 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 SUCLA2Q9P2R7 463 aaPredicted RBP16.15■□□□□ 0.18
ABR-228ENST00000574437 TRAF3IP3Q9Y228 551 aa16.15■□□□□ 0.18
ABR-228ENST00000574437 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
ABR-228ENST00000574437 TMEM110-MUSTN1A8MSY1 372 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 F8VZ95 297 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 CTNND1O60716 968 aaKnown RBP16.14■□□□□ 0.17
ABR-228ENST00000574437 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
ABR-228ENST00000574437 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 PIGOQ8TEQ8 1089 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 SLC35C1Q96A29 364 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 PSMD1Q99460 953 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 MXD3Q9BW11 206 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 USP40Q9NVE5 1235 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 PITPNM2Q9BZ72 1349 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 SLFN12Q8IYM2 578 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 PAGR1Q9BTK6 254 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 CCDC113Q9H0I3 377 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 FAM114A2Q9NRY5 505 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 GEMIN8Q9NWZ8 242 aaKnown RBP16.14■□□□□ 0.17
ABR-228ENST00000574437 SNX24Q9Y343 169 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 DNM1LO00429 736 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 PDXKO00764 312 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 CAND2O75155 1236 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 ZNF76P36508 570 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 SMTNP53814 917 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 C6orf89Q6UWU4 347 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 RDH13Q8NBN7 331 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 METTL14Q9HCE5 456 aaKnown RBP16.14■□□□□ 0.17
ABR-228ENST00000574437 KCNMB3Q9NPA1 279 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 TYW1Q9NV66 732 aaKnown RBP16.14■□□□□ 0.17
ABR-228ENST00000574437 RGL1Q9NZL6 768 aa16.14■□□□□ 0.17
ABR-228ENST00000574437 COL24A1Q17RW2 1714 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 FERP16591 822 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 PRKCIP41743 596 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 NOVP48745 357 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 DR1Q01658 176 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
ABR-228ENST00000574437 AGBL2Q5U5Z8 902 aa16.13■□□□□ 0.17
ABR-228ENST00000574437 DPY19L2P1Q6NXN4 242 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms