RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PPP4R1LQ9P1A2 415 aa6.85□□□□□ -1.31
CDC27-216ENST00000574304 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 K7ESM1 405 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 CLSTN1O94985 981 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 IL2P60568 153 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 OCRLQ01968 901 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 ZNF568Q3ZCX4 644 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 ZMAT1Q5H9K5 638 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 SLFN13Q68D06 897 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 TRIM68Q6AZZ1 485 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 GLB1LQ6UWU2 654 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 LARP4Q71RC2 724 aaKnown RBP eCLIP6.84□□□□□ -1.31
CDC27-216ENST00000574304 THNSL2Q86YJ6 484 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
CDC27-216ENST00000574304 CNOT11Q9UKZ1 510 aaKnown RBP6.84□□□□□ -1.31
CDC27-216ENST00000574304 PRRG2O14669 202 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 LSSP48449 732 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 MEOX1P50221 254 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 STAT5BP51692 787 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 SMAD3P84022 425 aaKnown RBP6.83□□□□□ -1.32
CDC27-216ENST00000574304 MYBPC3Q14896 1274 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 PCOLCEQ15113 449 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 ZNF827Q17R98 1081 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 LIMS2Q7Z4I7 341 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 FILIP1Q7Z7B0 1213 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 RNF180Q86T96 592 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 PHYKPLQ8IUZ5 450 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 RTKN2Q8IZC4 609 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 C7orf31Q8N865 590 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 RTF1Q92541 710 aaKnown RBP6.83□□□□□ -1.32
CDC27-216ENST00000574304 PTPN18Q99952 460 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 KIAA1683Q9H0B3 1180 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 SPTLC3Q9NUV7 552 aa6.83□□□□□ -1.32
CDC27-216ENST00000574304 NCANO14594 1321 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 TGM5O43548 720 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 FKBP9O95302 570 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 CD40P25942 277 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 ADCYAP1R1P41586 468 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 LRRC32Q14392 662 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 NOLC1Q14978 699 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDC27-216ENST00000574304 AGBL4Q5VU57 503 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 TIGD7Q6NT04 549 aaPredicted RBP6.82□□□□□ -1.32
CDC27-216ENST00000574304 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 BCL6BQ8N143 479 aaPredicted RBP6.82□□□□□ -1.32
CDC27-216ENST00000574304 SSBP3Q9BWW4 388 aaPredicted RBP6.82□□□□□ -1.32
CDC27-216ENST00000574304 MEGF9Q9H1U4 602 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 SEC61A2Q9H9S3 476 aa6.82□□□□□ -1.32
CDC27-216ENST00000574304 MRE11P49959 708 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 DHCR24Q15392 516 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 C11orf74Q86VG3 221 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 OR5AN1Q8NGI8 311 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 RPGRQ92834 1020 aaKnown RBP6.81□□□□□ -1.32
CDC27-216ENST00000574304 LMF1Q96S06 567 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 POFUT1Q9H488 388 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 KCMF1Q9P0J7 381 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 MAGEL2Q9UJ55 1249 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
CDC27-216ENST00000574304 PRPF6O94906 941 aaKnown RBP6.8□□□□□ -1.32
CDC27-216ENST00000574304 APOL3O95236 402 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 STAT3P40763 770 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 MASP1P48740 699 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 BCAR1P56945 870 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 ADCY2Q08462 1091 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 TBR1Q16650 682 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 DGKDQ16760 1214 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 GPR158Q5T848 1215 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 USP30Q70CQ3 517 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 DDX46Q7L014 1031 aaKnown RBP6.8□□□□□ -1.32
CDC27-216ENST00000574304 CIR1Q86X95 450 aaPredicted RBP6.8□□□□□ -1.32
CDC27-216ENST00000574304 UBR7Q8N806 425 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 USP7Q93009 1102 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 NEIL1Q96FI4 390 aaPredicted RBP6.8□□□□□ -1.32
CDC27-216ENST00000574304 LOXL4Q96JB6 756 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 LRRC37BQ96QE4 947 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 MYL10Q9BUA6 226 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 OR10A2Q9H208 303 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 CAAP1Q9H8G2 361 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 EMC7Q9NPA0 242 aa6.8□□□□□ -1.32
CDC27-216ENST00000574304 SAE1Q9UBE0 346 aaPredicted RBP6.8□□□□□ -1.32
CDC27-216ENST00000574304 GPR42O15529 346 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 ARHGAP6O43182 974 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 BPIP17213 487 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 LSP1P33241 339 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 SOX5P35711 763 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 ANTXR2P58335 489 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 RAC3P60763 192 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 PHC1P78364 1004 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 EFEMP1Q12805 493 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 NFYCQ13952 458 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 EGFLAMQ63HQ2 1017 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 KIAA1841Q6NSI8 718 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 KANSL1Q7Z3B3 1105 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 CHAC2Q8WUX2 184 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 SAMD11Q96NU1 681 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 USP36Q9P275 1121 aaKnown RBP6.79□□□□□ -1.32
CDC27-216ENST00000574304 MSRAQ9UJ68 235 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 FAM184BQ9ULE4 1060 aa6.79□□□□□ -1.32
CDC27-216ENST00000574304 BUD31P41223 144 aaPredicted RBP6.78□□□□□ -1.32
CDC27-216ENST00000574304 TERF2Q15554 542 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms