RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 SEPT9Q9UHD8 586 aaPredicted RBP29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 SPTBN5Q9NRC6 3674 aaKnown RBP29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 XIRP2A4UGR9 3374 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 TMEM150BA6NC51 233 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 H3BNC9 293 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 EML1O00423 815 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 MGEA5O60502 916 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 STBD1O95210 358 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 GCFC2P16383 781 aaKnown RBP29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 TMOD1P28289 359 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 NLRP11P59045 1033 aaKnown RBP29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 BTG3Q14201 252 aaPredicted RBP29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 MTERF2Q49AM1 385 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 BANK1Q8NDB2 785 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 FAM20AQ96MK3 541 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 MAP7D2Q96T17 732 aa29.31■■■□□ 2.28
NPLOC4-215ENST00000574095 GPR182O15218 404 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 TARBP2Q15633 366 aaKnown RBP29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 C8orf34Q49A92 452 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 XKR3Q5GH77 459 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 FAM228AQ86W67 206 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 NPAS4Q8IUM7 802 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 TNFRSF25Q93038 417 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 ZNF668Q96K58 619 aaPredicted RBP29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 SH2D3AQ9BRG2 576 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 NIFKQ9BYG3 293 aaKnown RBP29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 BRMS1Q9HCU9 246 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 VAV3Q9UKW4 847 aa29.3■■■□□ 2.28
NPLOC4-215ENST00000574095 LINC00271P0C7V0 271 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 STAG3L1P0CL83 205 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 CTNNB1P35222 781 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 TBC1D8BQ0IIM8 1120 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 ODR4Q5SWX8 454 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 POTEDQ86YR6 584 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 HAS1Q92839 578 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 NAP1L4Q99733 375 aaKnown RBP29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 ADAM2Q99965 735 aa29.29■■■□□ 2.28
NPLOC4-215ENST00000574095 TCF20Q9UGU0 1960 aaKnown RBP29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 DDX11L8A8MPP1 907 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 MARCH6O60337 910 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 PPP2R5CQ13362 524 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 MRPL38Q96DV4 380 aaKnown RBP29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 ADAMTS10Q9H324 1103 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 LRFN2Q9ULH4 789 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 COG5Q9UP83 839 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 LIMCH1Q9UPQ0 1083 aa29.28■■■□□ 2.28
NPLOC4-215ENST00000574095 DENND3A2RUS2 1198 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 BTBD18B2RXH4 712 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 MMP1P03956 469 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 BMPR1AP36894 532 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 SARSP49591 514 aaKnown RBP29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 GATMP50440 423 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 PSMC5P62195 406 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 PAN2Q504Q3 1202 aaKnown RBP29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 HLA-CQ95604 372 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 CEP89Q96ST8 783 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 RGS18Q9NS28 235 aa29.27■■■□□ 2.28
NPLOC4-215ENST00000574095 TBX3O15119 743 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 KCNQ1P51787 676 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 DRP2Q13474 957 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 TRIM29Q14134 588 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 PTPROQ16827 1216 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 CCDC83Q8IWF9 413 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 IL27Q8NEV9 243 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 CLP1Q92989 425 aaKnown RBP29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 PCDHB7Q9Y5E2 793 aa29.26■■■□□ 2.27
NPLOC4-215ENST00000574095 C5orf67F2Z3F1 127 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 RB1P06400 928 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 GPC3P51654 580 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 AAK1Q2M2I8 961 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 DIS3L2Q8IYB7 885 aaKnown RBP29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 CMTR2Q8IYT2 770 aaKnown RBP29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 KIF2CQ99661 725 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 C1orf112Q9NSG2 853 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 RWDD3Q9Y3V2 267 aa29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 MRPL42Q9Y6G3 142 aaKnown RBP29.25■■■□□ 2.27
NPLOC4-215ENST00000574095 BMP1P13497 986 aa29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 EIF4BP23588 611 aaKnown RBP29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 QARSP47897 775 aaKnown RBP29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 PLA2G4FQ68DD2 849 aa29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 FAM43BQ6ZT52 329 aaPredicted RBP29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 SLC24A5Q71RS6 500 aa29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 ANO5Q75V66 913 aa29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 ADAMTS19Q8TE59 1207 aa29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 KIAA1671Q9BY89 1806 aa29.24■■■□□ 2.27
NPLOC4-215ENST00000574095 C9IYK1 514 aa29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 BAG4O95429 457 aaKnown RBP29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 GUCY1B3Q02153 619 aa29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 NCAPH2Q6IBW4 605 aa29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 ZNF710Q8N1W2 664 aa29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 SCLT1Q96NL6 688 aa29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 WRAP73Q9P2S5 460 aaPredicted RBP29.23■■■□□ 2.27
NPLOC4-215ENST00000574095 IGKV6-21A0A0C4DH24 114 aa29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 P4HBP07237 508 aaKnown RBP29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 DSC3Q14574 896 aa29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 EPHA7Q15375 998 aa29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 FAM102BQ5T8I3 360 aa29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 SLFN12Q8IYM2 578 aa29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 NLRP7Q8WX94 980 aa29.22■■■□□ 2.27
NPLOC4-215ENST00000574095 C11orf84Q9BUA3 381 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms