RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 MAFBQ9Y5Q3 323 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-210ENST00000573903 WDR64B1ANS9 1081 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 HOXA2O43364 376 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 PRPF3O43395 683 aaKnown RBP13.79□□□□□ -0.2
CCDC40-210ENST00000573903 MGEA5O60502 916 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 REC8O95072 547 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 C22orf31O95567 290 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 VTNP04004 478 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 DNAJB1P25685 340 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-210ENST00000573903 ADGRD2Q7Z7M1 963 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 RBM23Q86U06 439 aaKnown RBP13.79□□□□□ -0.2
CCDC40-210ENST00000573903 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 ZNF710Q8N1W2 664 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 CRYGNQ8WXF5 182 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 SCLT1Q96NL6 688 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-210ENST00000573903 TLE6Q9H808 572 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 GABBR1Q9UBS5 961 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 NID2Q14112 1375 aa13.79□□□□□ -0.2
CCDC40-210ENST00000573903 ZBTB42B2RXF5 422 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 C9IYK1 514 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 FGF18O76093 207 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 CPA1P15085 419 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-210ENST00000573903 LAG3P18627 525 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 PSMA5P28066 241 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
CCDC40-210ENST00000573903 FAM228AQ86W67 206 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 PHKBQ93100 1093 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 ELAC1Q9H777 363 aaKnown RBP13.78□□□□□ -0.2
CCDC40-210ENST00000573903 WDR81Q562E7 1941 aa13.78□□□□□ -0.2
CCDC40-210ENST00000573903 GAS7O60861 476 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 EYA4O95677 639 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 ATP4AP20648 1035 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 RPS6KB1P23443 525 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 CIITAP33076 1130 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 HSPA4P34932 840 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 CLCN3P51790 818 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 COASYQ13057 564 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 PKN1Q16512 942 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 FAM102BQ5T8I3 360 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 RNF135Q8IUD6 432 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 TRIM22Q8IYM9 498 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 SMRP1Q8NCR6 262 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 MSLNLQ96KJ4 702 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 CDCA3Q99618 268 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-210ENST00000573903 SLC26A6Q9BXS9 759 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 NRBP2Q9NSY0 501 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.21
CCDC40-210ENST00000573903 MUTYHQ9UIF7 546 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 BARX2Q9UMQ3 279 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-210ENST00000573903 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.21
CCDC40-210ENST00000573903 GPR32O75388 356 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 OATP04181 439 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 FGFR1P11362 822 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 SFNP31947 248 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 JAK3P52333 1124 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
CCDC40-210ENST00000573903 NLRP5P59047 1200 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 HERC4Q5GLZ8 1057 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-210ENST00000573903 LRRC43Q8N309 656 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 TEKT3Q9BXF9 490 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 KCNH6Q9H252 994 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 ENTPD7Q9NQZ7 604 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 TYW1Q9NV66 732 aaKnown RBP13.76□□□□□ -0.21
CCDC40-210ENST00000573903 CLEC1BQ9P126 229 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 VPS54Q9P1Q0 977 aa13.76□□□□□ -0.21
CCDC40-210ENST00000573903 CHMP2AO43633 222 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 IFNAR1P17181 557 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
CCDC40-210ENST00000573903 PPM1AP35813 382 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 USP11P51784 963 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 PRKCEQ02156 737 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 KRT17Q04695 432 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 LRCH2Q5VUJ6 765 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 LRRC71Q8N4P6 559 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
CCDC40-210ENST00000573903 KCNB2Q92953 911 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 ZNF558Q96NG5 402 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 RIT2Q99578 217 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 SH3GLB2Q9NR46 395 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 LZTS1Q9Y250 596 aa13.75□□□□□ -0.21
CCDC40-210ENST00000573903 USP15Q9Y4E8 981 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-210ENST00000573903 PCDHGC5Q9Y5F6 944 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms