RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 M0QZ92 97 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 MAFO75444 373 aaPredicted RBP16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 RPLP2P05387 115 aaKnown RBP16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 PLA2G4BP0C869 781 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 RAG1P15918 1043 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 CMA1P23946 247 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 SCN5AQ14524 2016 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 EMC2Q15006 297 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 RUFY4Q6ZNE9 571 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 KCNK18Q7Z418 384 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 LRRC71Q8N4P6 559 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 CAGE1Q8TC20 777 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 STK17AQ9UEE5 414 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 AKT3Q9Y243 479 aa16.15■□□□□ 0.18
NPLOC4-209ENST00000572760 A0A1B0GVL5 298 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 A0A1W2PQ27 194 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 A0A1W2PQ64 194 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 A0A1W2PQD8 194 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 GAS2O43903 313 aaKnown RBP16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 CLCN3P51790 818 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 MLLT1Q03111 559 aaPredicted RBP16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 SH3RF1Q7Z6J0 888 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 NME8Q8N427 588 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 IQUBQ8NA54 791 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 TCP11Q8WWU5 503 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 MRPS27Q92552 414 aaKnown RBP16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 RAD54LQ92698 747 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 DHX58Q96C10 678 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 TBX21Q9UL17 535 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 KCNH3Q9ULD8 1083 aa16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 ZMYND8Q9ULU4 1186 aaPredicted RBP16.14■□□□□ 0.17
NPLOC4-209ENST00000572760 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 KRT18P05783 430 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 CTSHP09668 335 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 SYN1P17600 705 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 TMEM62Q0P6H9 643 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 MCM6Q14566 821 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 IER5Q5VY09 327 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 SYT2Q8N9I0 419 aaPredicted RBP16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 DHX38Q92620 1227 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 WNT8BQ93098 351 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 TMEM143Q96AN5 459 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 CEP89Q96ST8 783 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 NOC4LQ9BVI4 516 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 SUCLA2Q9P2R7 463 aaPredicted RBP16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 TANC1Q9C0D5 1861 aa16.13■□□□□ 0.17
NPLOC4-209ENST00000572760 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 TRIM43BA6NCK2 446 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 CAND2O75155 1236 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 TIMP1P01033 207 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 CKBP12277 381 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 SELPP16109 830 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 PFKFB1P16118 471 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 CYP11B2P19099 503 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 CYP2C18P33260 490 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 SYKP43405 635 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 CCL23P55773 120 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 FAM102BQ5T8I3 360 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 RINT1Q6NUQ1 792 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 SV2BQ7L1I2 683 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 GPBP1Q86WP2 473 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 KIAA0319LQ8IZA0 1049 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 PSPC1Q8WXF1 523 aaKnown RBP16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 TRIM43Q96BQ3 446 aaPredicted RBP16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 CUEDC2Q9H467 287 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 BLOC1S4Q9NUP1 217 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 GINS2Q9Y248 185 aa16.12■□□□□ 0.17
NPLOC4-209ENST00000572760 A0A087X0B3 334 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 RSPH10B2B2RC85 870 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 PRPF40AO75400 957 aaKnown RBP16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 VTNP04004 478 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 RSPH10BP0C881 870 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 SLC12A3P55017 1021 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 MRPS6P82932 125 aaKnown RBP16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 TRIM71Q2Q1W2 868 aaKnown RBP16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 ZNF618Q5T7W0 954 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 LRRC8DQ7L1W4 858 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 RPAINQ86UA6 219 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 TMEM199Q8N511 208 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 PPP1R16BQ96T49 567 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 LRRC27Q9C0I9 530 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 TRPV2Q9Y5S1 764 aa16.11■□□□□ 0.17
NPLOC4-209ENST00000572760 CDY2AQ9Y6F7 541 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms