RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 MMP1P03956 469 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 CYP3A7P24462 503 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 PRKCEQ02156 737 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 STK3Q13188 491 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 SLC24A5Q71RS6 500 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 EXOC8Q8IYI6 725 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 PABPC5Q96DU9 382 aaKnown RBP10.98□□□□□ -0.65
CIITA-207ENST00000571545 SCLT1Q96NL6 688 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 OSBPL7Q9BZF2 842 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 ELAC1Q9H777 363 aaKnown RBP10.98□□□□□ -0.65
CIITA-207ENST00000571545 ERVK-5Q9HDB9 667 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 RGS18Q9NS28 235 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 AKT3Q9Y243 479 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 PPME1Q9Y570 386 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 KIAA1671Q9BY89 1806 aa10.98□□□□□ -0.65
CIITA-207ENST00000571545 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 M0R2N6 131 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 CHMP2AO43633 222 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 PSMD10O75832 226 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 ZSCAN20P17040 1043 aaPredicted RBP10.97□□□□□ -0.65
CIITA-207ENST00000571545 ATP4AP20648 1035 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 KCNA5P22460 613 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 DNM2P50570 870 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 UBE3AQ05086 875 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 XKR3Q5GH77 459 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 MIER3Q7Z3K6 550 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 NEK8Q86SG6 692 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 LINC01599Q8WXQ3 324 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 ZBTB10Q96DT7 871 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 OSMRQ99650 979 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 TMEM161AQ9NX61 479 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 DDX25Q9UHL0 483 aaKnown RBP10.97□□□□□ -0.65
CIITA-207ENST00000571545 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
CIITA-207ENST00000571545 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
CIITA-207ENST00000571545 TBX3O15119 743 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 PFKFB2O60825 505 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 PPFIA3O75145 1194 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 GPR32O75388 356 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 LINC00271P0C7V0 271 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
CIITA-207ENST00000571545 CLCN3P51790 818 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 PSMC5P62195 406 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 SCRN1Q12765 414 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 COL19A1Q14993 1142 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 TCEAL5Q5H9L2 206 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 MBOAT7Q96N66 472 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 ADAM2Q99965 735 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 INO80BQ9C086 356 aaPredicted RBP10.96□□□□□ -0.65
CIITA-207ENST00000571545 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 DACT1Q9NYF0 836 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 SEPT9Q9UHD8 586 aaPredicted RBP10.96□□□□□ -0.65
CIITA-207ENST00000571545 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
CIITA-207ENST00000571545 NOC2LQ9Y3T9 749 aaKnown RBP10.96□□□□□ -0.65
CIITA-207ENST00000571545 ATG2AQ2TAZ0 1938 aa10.96□□□□□ -0.66
CIITA-207ENST00000571545 VCANP13611 3396 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 C9IYK1 514 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 GAS2O43903 313 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 MARCH6O60337 910 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 BAG4O95429 457 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 TDP2O95551 362 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 VTNP04004 478 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 CENPBP07199 599 aaPredicted RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 SKIP12755 728 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 LAG3P18627 525 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 SFPQP23246 707 aaKnown RBP eCLIP10.95□□□□□ -0.66
CIITA-207ENST00000571545 PPM1AP35813 382 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 PPP2R5CQ13362 524 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 INF2Q27J81 1249 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 TMEM266Q2M3C6 531 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 LETM2Q2VYF4 491 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 SPOUT1Q5T280 376 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 PTCRAQ6ISU1 281 aaPredicted RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 TRMT1LQ7Z2T5 733 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 ZNF410Q86VK4 478 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 FAM228AQ86W67 206 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 ABI1Q8IZP0 508 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 LINC01465Q8N7H1 131 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 ETNPPLQ8TBG4 499 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 NEK9Q8TD19 979 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 TMEM40Q8WWA1 233 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 NIFKQ9BYG3 293 aaKnown RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 GCOM2Q9BZD3 368 aaPredicted RBP10.95□□□□□ -0.66
CIITA-207ENST00000571545 TMX1Q9H3N1 280 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 PRKAG3Q9UGI9 489 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 PLAGL2Q9UPG8 496 aa10.95□□□□□ -0.66
CIITA-207ENST00000571545 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms