RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 FGFR1P11362 822 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
CIITA-205ENST00000571186 SIGLEC14Q08ET2 396 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 APOBRQ0VD83 1088 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 KIZQ2M2Z5 673 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 PLPP4Q5VZY2 271 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 SWSAP1Q6NVH7 229 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
CIITA-205ENST00000571186 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
CIITA-205ENST00000571186 APOL5Q9BWW9 433 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 ZNF302Q9NR11 478 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 PUF60Q9UHX1 559 aaKnown RBP16.26■□□□□ 0.19
CIITA-205ENST00000571186 PTPRZ1P23471 2315 aaPredicted RBP16.26■□□□□ 0.19
CIITA-205ENST00000571186 COL1A2P08123 1366 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 CNTNAP5Q8WYK1 1306 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 SRGAP2BP0DMP2 458 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 TECP42680 631 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
CIITA-205ENST00000571186 MIS18BP1Q6P0N0 1132 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 SGMS1Q86VZ5 419 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 CCDC60Q8IWA6 550 aaPredicted RBP16.25■□□□□ 0.19
CIITA-205ENST00000571186 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 SUSD6Q92537 303 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 OSMRQ99650 979 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 CWH43Q9H720 699 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
CIITA-205ENST00000571186 TMEM161AQ9NX61 479 aa16.25■□□□□ 0.19
CIITA-205ENST00000571186 FSCN2O14926 492 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 SEC24BO95487 1268 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 VTNP04004 478 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 LAG3P18627 525 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 SREBF1P36956 1147 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 FAM189BP81408 668 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 TCF15Q12870 199 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 RTN1Q16799 776 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 PPP1R18Q6NYC8 613 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 Q6ZUG5 572 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 ZBTB33Q86T24 672 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 FAM228AQ86W67 206 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
CIITA-205ENST00000571186 ENTPD7Q9NQZ7 604 aa16.24■□□□□ 0.19
CIITA-205ENST00000571186 KLF18A0A0U1RQI7 1052 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 ZBTB42B2RXF5 422 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 IPO5O00410 1097 aaKnown RBP16.23■□□□□ 0.19
CIITA-205ENST00000571186 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
CIITA-205ENST00000571186 ATP4AP20648 1035 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 RPS6KB1P23443 525 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 SP100P23497 879 aaPredicted RBP16.23■□□□□ 0.19
CIITA-205ENST00000571186 AP3B2Q13367 1082 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 JAKMIP3Q5VZ66 844 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 ANKRD54Q6NXT1 300 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 TMEM184AQ6ZMB5 413 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 GLT8D2Q9H1C3 349 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 S1PR5Q9H228 398 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 ELAC1Q9H777 363 aaKnown RBP16.23■□□□□ 0.19
CIITA-205ENST00000571186 BARHL2Q9NY43 387 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 LZTS1Q9Y250 596 aa16.23■□□□□ 0.19
CIITA-205ENST00000571186 FAM86B1E9PN63 330 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 DHX15O43143 795 aaKnown RBP16.22■□□□□ 0.19
CIITA-205ENST00000571186 ZBTB43O43298 467 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 GPR32O75388 356 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 C22orf31O95567 290 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 FAM86B2P0C5J1 330 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 AVPR2P30518 371 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 CLK2P49760 499 aaKnown RBP16.22■□□□□ 0.19
CIITA-205ENST00000571186 VCPP55072 806 aaKnown RBP16.22■□□□□ 0.19
CIITA-205ENST00000571186 FGD1P98174 961 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 PLCB3Q01970 1234 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 KRT17Q04695 432 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 FUT2Q10981 343 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 DSC3Q14574 896 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 PTPN21Q16825 1174 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 SYCE2Q6PIF2 218 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 KCNT2Q6UVM3 1135 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 TMC7Q7Z402 723 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 ABI1Q8IZP0 508 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 BBXQ8WY36 941 aaPredicted RBP16.22■□□□□ 0.19
CIITA-205ENST00000571186 BRF1Q92994 677 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 ASIC4Q96FT7 647 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 CASD1Q96PB1 797 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 ZNF577Q9BSK1 485 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 TMEM117Q9H0C3 514 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 NGRNQ9NPE2 291 aaKnown RBP16.22■□□□□ 0.19
CIITA-205ENST00000571186 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
CIITA-205ENST00000571186 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
CIITA-205ENST00000571186 HIDE1A8MVS5 230 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 hCG_1984214I3L0E3 225 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 HOXA2O43364 376 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.19
CIITA-205ENST00000571186 ST18O60284 1047 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms