RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 EAF2Q96CJ1 260 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 ZNF558Q96NG5 402 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 IER2Q9BTL4 223 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 ZNF287Q9HBT7 754 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 PADI3Q9ULW8 664 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 AHCTF1Q8WYP5 2266 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 WDR19Q8NEZ3 1342 aa7.78□□□□□ -1.16
HERPUD1-217ENST00000569429 UBR5O95071 2799 aaPredicted RBP7.77□□□□□ -1.16
HERPUD1-217ENST00000569429 EML5Q05BV3 1969 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 GGPS1O95749 300 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 LAMP2P13473 410 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 CEACAM1P13688 526 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 TARSP26639 723 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 ZNF605Q86T29 641 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 SLC39A11Q8N1S5 342 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 FAM160A2Q8N612 972 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 TAAR1Q96RJ0 339 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 TMX1Q9H3N1 280 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 C1orf112Q9NSG2 853 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 SUPT16HQ9Y5B9 1047 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 NUMBLQ9Y6R0 609 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 SLC4A4Q9Y6R1 1079 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 ITPR3Q14573 2671 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 CLUHO75153 1309 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 IGSF9BQ9UPX0 1349 aa7.77□□□□□ -1.17
HERPUD1-217ENST00000569429 ABCA7Q8IZY2 2146 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 WDR81Q562E7 1941 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 FAM221BA6H8Z2 402 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 LILRB3O75022 631 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 TGFB3P10600 412 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 CTSAP10619 480 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 CSRP1P21291 193 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 ADD2P35612 726 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 MRPS6P82932 125 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 SRSF1Q07955 248 aaKnown RBP eCLIP7.76□□□□□ -1.179e-10■■■■■ 41.4
HERPUD1-217ENST00000569429 PAK2Q13177 524 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 OS9Q13438 667 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 PPP4R3BQ5MIZ7 849 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 SYDE2Q5VT97 1194 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 RNF43Q68DV7 783 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 LRRC55Q6ZSA7 311 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 STK11IPQ8N1F8 1099 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 SYTL5Q8TDW5 730 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 DNAJB3Q8WWF6 145 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 CHMP4CQ96CF2 233 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 LOXL4Q96JB6 756 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 RMDN3Q96TC7 470 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 ZBP1Q9H171 429 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 RNF39Q9H2S5 420 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 CHRDQ9H2X0 955 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 MLXIPQ9HAP2 919 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 SCUBE2Q9NQ36 999 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 CCDC171Q6TFL3 1326 aa7.76□□□□□ -1.17
HERPUD1-217ENST00000569429 ATG2BQ96BY7 2078 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 NOTCH4Q99466 2003 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 MBLAC1A4D2B0 266 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SPDYE4A6NLX3 237 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 C9IYK1 514 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 J3QKU1 62 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 PRB1P04280 392 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 NR3C2P08235 984 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 TSPY3P0CV98 308 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 TSPY8P0CW00 308 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 CD72P21854 359 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 UBA1P22314 1058 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 CA8P35219 290 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SLC16A2P36021 539 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 PBX3P40426 434 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 CCR3P51677 355 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 PFKPQ01813 784 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SP2Q02086 613 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ADCY1Q08828 1119 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 POLA2Q14181 598 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 WTAPQ15007 396 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ALDH1L2Q3SY69 923 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SLFNL1Q499Z3 407 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 PLA2G2CQ5R387 149 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SH3PXD2AQ5TCZ1 1133 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 IER5Q5VY09 327 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 TTBK2Q6IQ55 1244 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 GIMAP6Q6P9H5 292 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SLC24A5Q71RS6 500 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 DCAF4Q8WV16 495 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 UBL7Q96S82 380 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 TMEM117Q9H0C3 514 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ARRDC1-AS1Q9H2J1 176 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ELAC1Q9H777 363 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 PRKRIP1Q9H875 184 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 RGS18Q9NS28 235 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 COL20A1Q9P218 1284 aa7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ZNF215Q9UL58 517 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 SALL2Q9Y467 1007 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-217ENST00000569429 ATMQ13315 3056 aa7.74□□□□□ -1.17
HERPUD1-217ENST00000569429 MINDY4BA8MYZ0 360 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms