RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 SLC28A3Q9HAS3 691 aa11□□□□□ -0.65
CLN6-209ENST00000569336 AKT3Q9Y243 479 aa11□□□□□ -0.65
CLN6-209ENST00000569336 GAS2O43903 313 aaKnown RBP10.99□□□□□ -0.65
CLN6-209ENST00000569336 PLA2G5P39877 138 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 CDC42EP1Q00587 391 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 CYP4A11Q02928 519 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 TMEM62Q0P6H9 643 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 LPIN1Q14693 890 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 TARBP2Q15633 366 aaKnown RBP10.99□□□□□ -0.65
CLN6-209ENST00000569336 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
CLN6-209ENST00000569336 EFCAB12Q6NXP0 572 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 BRAPQ7Z569 592 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 HSCBQ8IWL3 235 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 C4orf19Q8IY42 314 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 SYMPKQ92797 1274 aaKnown RBP10.99□□□□□ -0.65
CLN6-209ENST00000569336 ZBTB10Q96DT7 871 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 SCLT1Q96NL6 688 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
CLN6-209ENST00000569336 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
CLN6-209ENST00000569336 POTEMA6NI47 508 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 GRXCR1A8MXD5 290 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 WNT7AO00755 349 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 TLL1O43897 1013 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 GJB5O95377 273 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 YWHABP31946 246 aaKnown RBP10.98□□□□□ -0.65
CLN6-209ENST00000569336 RFC5P40937 340 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 CLCN3P51790 818 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
CLN6-209ENST00000569336 PPP2R2DQ66LE6 453 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 ANO5Q75V66 913 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 MYOCDQ8IZQ8 938 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 SNX21Q969T3 373 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 DYDC2Q96IM9 177 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 EIF2AK1Q9BQI3 630 aaKnown RBP10.98□□□□□ -0.65
CLN6-209ENST00000569336 TMEM60Q9H2L4 133 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 CYP26B1Q9NR63 512 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 GINS2Q9Y248 185 aa10.98□□□□□ -0.65
CLN6-209ENST00000569336 NCOR1O75376 2440 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 VPS37CA5D8V6 355 aaPredicted RBP10.97□□□□□ -0.65
CLN6-209ENST00000569336 GPR182O15218 404 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
CLN6-209ENST00000569336 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 LYPLA2O95372 231 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 VTNP04004 478 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 HSP90AA1P07900 732 aaKnown RBP10.97□□□□□ -0.65
CLN6-209ENST00000569336 MUTP22033 750 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 PBX2P40425 430 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 PRPHP41219 470 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLN6-209ENST00000569336 CRYBB1P53674 252 aaPredicted RBP10.97□□□□□ -0.65
CLN6-209ENST00000569336 DEFB103AP81534 67 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 PTGDRQ13258 359 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
CLN6-209ENST00000569336 ZNF174Q15697 407 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 KIZQ2M2Z5 673 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 PLA2G4FQ68DD2 849 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 LRRC71Q8N4P6 559 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 LINC01465Q8N7H1 131 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 TCP11Q8WWU5 503 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 CEP170P1Q96L14 293 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 RAD9AQ99638 391 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 ZNF576Q9H609 170 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 SUGCTQ9HAC7 445 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
CLN6-209ENST00000569336 IGKV6-21A0A0C4DH24 114 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 STBD1O95210 358 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 BMP15O95972 392 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 CA3P07451 260 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 CD52P31358 61 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 TECP42680 631 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 GPC3P51654 580 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 RABGGTBP53611 331 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.65
CLN6-209ENST00000569336 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.65
CLN6-209ENST00000569336 EMC2Q15006 297 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 TCTN1Q2MV58 587 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 XKR9Q5GH70 373 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 ZNF410Q86VK4 478 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 NLRP7Q8WX94 980 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 GUCD1Q96NT3 240 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 OSMRQ99650 979 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 HSD17B14Q9BPX1 270 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.65
CLN6-209ENST00000569336 NKX2-4Q9H2Z4 354 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 TTYH1Q9H313 450 aaPredicted RBP10.96□□□□□ -0.65
CLN6-209ENST00000569336 SEMA6BQ9H3T3 888 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.96□□□□□ -0.65
CLN6-209ENST00000569336 ANKEF1Q9NU02 776 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 RGL1Q9NZL6 768 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 PADI3Q9ULW8 664 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 YBX2Q9Y2T7 364 aaKnown RBP10.96□□□□□ -0.65
CLN6-209ENST00000569336 INSL6Q9Y581 213 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 PCDHB6Q9Y5E3 794 aa10.96□□□□□ -0.65
CLN6-209ENST00000569336 DENND3A2RUS2 1198 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 TMEM150BA6NC51 233 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms