RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 ST3GAL5Q9UNP4 418 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 GINS2Q9Y248 185 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-223ENST00000568301 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
COMMD4-223ENST00000568301 DENND3A2RUS2 1198 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 C9IYK1 514 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 PER2O15055 1255 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 MGEA5O60502 916 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 CRYBB1P53674 252 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-223ENST00000568301 FGD1P98174 961 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 RBM10P98175 930 aaKnown RBP17.07■□□□□ 0.32
COMMD4-223ENST00000568301 SETQ01105 290 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-223ENST00000568301 SMAP1Q8IYB5 467 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-223ENST00000568301 TMEM40Q8WWA1 233 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 ZNF577Q9BSK1 485 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 TLE6Q9H808 572 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 C6orf50Q9HD87 102 aa17.07■□□□□ 0.32
COMMD4-223ENST00000568301 VPS13AQ96RL7 3174 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 PRPF3O43395 683 aaKnown RBP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 CDC45O75419 566 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 C22orf31O95567 290 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 GNA11P29992 359 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 PTPN5P54829 565 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 FAM189BP81408 668 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 TCF15Q12870 199 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 CENPQQ7L2Z9 268 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 REXO1Q8N1G1 1221 aaKnown RBP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 ZNF710Q8N1W2 664 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 KCNB2Q92953 911 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 RPGRIP1Q96KN7 1286 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 PHF7Q9BWX1 381 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 ELAC1Q9H777 363 aaKnown RBP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-223ENST00000568301 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 PCDHA10Q9Y5I2 948 aa17.06■□□□□ 0.32
COMMD4-223ENST00000568301 MAGEB2O15479 319 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 GPR32O75388 356 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 PSAPP07602 524 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 CIITAP33076 1130 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 PKN1Q16512 942 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 PDE12Q6L8Q7 609 aaKnown RBP17.05■□□□□ 0.32
COMMD4-223ENST00000568301 SUGP1Q8IWZ8 645 aaKnown RBP17.05■□□□□ 0.32
COMMD4-223ENST00000568301 FBXL16Q8N461 479 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 MICAL1Q8TDZ2 1067 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 TMEM161AQ9NX61 479 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
COMMD4-223ENST00000568301 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 TBKBP1A7MCY6 615 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 ERVFC1P60507 584 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 DSC3Q14574 896 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 SPOUT1Q5T280 376 aaKnown RBP17.04■□□□□ 0.32
COMMD4-223ENST00000568301 Q6ZUG5 572 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 FBXL6Q8N531 539 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 SUSD6Q92537 303 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 ATP6V0A4Q9HBG4 840 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 TLR9Q9NR96 1032 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 TYW1Q9NV66 732 aaKnown RBP17.04■□□□□ 0.32
COMMD4-223ENST00000568301 HCSTQ9UBK5 93 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
COMMD4-223ENST00000568301 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-223ENST00000568301 NID2Q14112 1375 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 FGF18O76093 207 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 VTNP04004 478 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 SIGLEC14Q08ET2 396 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 PRR16Q569H4 304 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 FAM228AQ86W67 206 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 SKAP1Q86WV1 359 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 BRF1Q92994 677 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 FAM167AQ96KS9 214 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 CDCA3Q99618 268 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-223ENST00000568301 OSMRQ99650 979 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 PRRX2Q99811 253 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 GABBR1Q9UBS5 961 aa17.03■□□□□ 0.32
COMMD4-223ENST00000568301 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-223ENST00000568301 TMOD1P28289 359 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 VCPP55072 806 aaKnown RBP17.02■□□□□ 0.32
COMMD4-223ENST00000568301 AKAP17AQ02040 695 aaKnown RBP17.02■□□□□ 0.32
COMMD4-223ENST00000568301 DUSP6Q16828 381 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 COLGALT1Q8NBJ5 622 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 LENG9Q96B70 501 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 ASIC4Q96FT7 647 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 SNX27Q96L92 541 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 AGXT2Q9BYV1 514 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 NRBP2Q9NSY0 501 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 FAM86C1Q9NVL1 165 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 LZTS1Q9Y250 596 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 SAMM50Q9Y512 469 aa17.02■□□□□ 0.32
COMMD4-223ENST00000568301 WDR64B1ANS9 1081 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 FSCN2O14926 492 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 HOXA2O43364 376 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms