RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DRC1Q96MC2 740 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 PANX2Q96RD6 677 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 ZNF302Q9NR11 478 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 ABHD10Q9NUJ1 306 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 AGPAT5Q9NUQ2 364 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 TRAF3IP3Q9Y228 551 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 IVNS1ABPQ9Y6Y0 642 aa7.77□□□□□ -1.16
SMG1-215ENST00000568239 WDR81Q562E7 1941 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 A0A0G2JMZ2 1700 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 EIF3DO15371 548 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMG1-215ENST00000568239 SLC16A4O15374 487 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 SUPT20HL2P0C7V6 817 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 CASP4P49662 377 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 ZNF131P52739 623 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 ABHD15Q6UXT9 468 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 TMEM139Q8IV31 216 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 RDH13Q8NBN7 331 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 SENP7Q9BQF6 1050 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 KIFC3Q9BVG8 833 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 MAF1Q9H063 256 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 GBP3Q9H0R5 595 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 ANKEF1Q9NU02 776 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 ARMCX3Q9UH62 379 aaPredicted RBP7.77□□□□□ -1.17
SMG1-215ENST00000568239 NOP56O00567 594 aaKnown RBP7.77□□□□□ -1.17
SMG1-215ENST00000568239 AKAP3O75969 853 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 EPB41P11171 864 aaKnown RBP7.77□□□□□ -1.17
SMG1-215ENST00000568239 PLS3P13797 630 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 ICAM3P32942 547 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 NEDD9Q14511 834 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 SPRYD7Q5W111 196 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 CST9Q5W186 159 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 TOGARAM2Q6ZUX3 1019 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 PPP1R13BQ96KQ4 1090 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 FIZ1Q96SL8 496 aa7.77□□□□□ -1.17
SMG1-215ENST00000568239 UNCXA6NJT0 531 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 TGFB1I1O43294 461 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 FARP2O94887 1054 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 XRCC5P13010 732 aaKnown RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 EDNRBP24530 442 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ZNF157P51786 506 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 SMTNP53814 917 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 POLGP54098 1239 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 DMP1Q13316 513 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 BMT2Q1RMZ1 405 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 HAUS6Q7Z4H7 955 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ZNF397Q8NF99 534 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 OR8K1Q8NGG5 319 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 GLG1Q92896 1179 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 CCDC51Q96ER9 411 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 NUP58Q9BVL2 599 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 PCIF1Q9H4Z3 704 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 CYP26B1Q9NR63 512 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 SYNGAP1Q96PV0 1343 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ZSCAN12O43309 604 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ARIH2O95376 493 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 MARK3P27448 753 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ADORA2AP29274 412 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 TCF7P36402 384 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 KCNH2Q12809 1159 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 GRM1Q13255 1194 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 XKR3Q5GH77 459 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 FOXR2Q6PJQ5 311 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 CACNA2D4Q7Z3S7 1137 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 DPP9Q86TI2 863 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 GTF3C2Q8WUA4 911 aaPredicted RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 ERGIC2Q96RQ1 377 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 AZI2Q9H6S1 392 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 KMT5AQ9NQR1 393 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 PDGFCQ9NRA1 345 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ZNHIT6Q9NWK9 470 aaKnown RBP7.76□□□□□ -1.17
SMG1-215ENST00000568239 CAPN11Q9UMQ6 739 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 FRMD4BQ9Y2L6 1034 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 PPP2R2CQ9Y2T4 447 aa7.76□□□□□ -1.17
SMG1-215ENST00000568239 ZMYM2Q9UBW7 1377 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 DNAJC25-GNG10A0A024R161 153 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 TISP43B9A030 160 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 CCP110O43303 1012 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 EXOC3O60645 756 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 DGAT1O75907 488 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 TXNP10599 105 aaKnown RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 TGFB3P10600 412 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 STAT5BP51692 787 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 HSDL1Q3SXM5 330 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 CYP26C1Q6V0L0 522 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 RAD9BQ6WBX8 426 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 TRIM59Q8IWR1 403 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 DHX37Q8IY37 1157 aaKnown RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 NEK11Q8NG66 645 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 COPS5Q92905 334 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 FGD4Q96M96 766 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 PARK7Q99497 189 aaKnown RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 CHP1Q99653 195 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 PTPN18Q99952 460 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 NAA15Q9BXJ9 866 aaKnown RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 NLRC4Q9NPP4 1024 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 AGPAT3Q9NRZ7 376 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 EPHB6O15197 1021 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 OATP04181 439 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 ZBTB48P10074 688 aaPredicted RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 PSMC2P35998 433 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms