RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 SLFN13Q68D06 897 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 TMED8Q6PL24 325 aaPredicted RBP12.63□□□□□ -0.39
SIN3A-208ENST00000567289 TRPM8Q7Z2W7 1104 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 SLC17A8Q8NDX2 589 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 RAD54LQ92698 747 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 TTC17Q96AE7 1141 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 NR3C1P04150 777 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 ESRRAP11474 423 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 STRN3Q13033 797 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 TTMPQ5BVD1 217 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 SYCP2LQ5T4T6 812 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 NAP1L4Q99733 375 aaKnown RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 TXLNGQ9NUQ3 528 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 MAD1L1Q9Y6D9 718 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 UTYO14607 1347 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 CCT8L1PA6NM43 557 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 CAND2O75155 1236 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 TRPA1O75762 1119 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 KRT19P08727 400 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 TTI2Q6NXR4 508 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 TYW1Q9NV66 732 aaKnown RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 IRAK4Q9NWZ3 460 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 GDF11O95390 407 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 ANP32DO95626 131 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 ITIH3Q06033 890 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 ANAPC7Q9UJX3 599 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 WNT7AO00755 349 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 OPLAHO14841 1288 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 KIF1CO43896 1103 aaKnown RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 KITP10721 976 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 SCYL2Q6P3W7 929 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 SPATA24Q86W54 205 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 TSNARE1Q96NA8 513 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 MAGED2Q9UNF1 606 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-208ENST00000567289 GINS2Q9Y248 185 aa12.62□□□□□ -0.39
SIN3A-208ENST00000567289 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 GYG2O15488 501 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 SKIP12755 728 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 UCHL3P15374 230 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 SAT1P21673 171 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 IL6STP40189 918 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 KYNUQ16719 465 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 KDM7AQ6ZMT4 941 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 DDX20Q9UHI6 824 aaKnown RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 MAPK13O15264 365 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 BYSLQ13895 437 aaKnown RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 MIER3Q7Z3K6 550 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 TRIM59Q8IWR1 403 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 SLC35G2Q8TBE7 412 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 PIP4K2CQ8TBX8 421 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 FBXO41Q8TF61 875 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 TLR10Q9BXR5 811 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 RAB20Q9NX57 234 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 PLS3P13797 630 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 GCFC2P16383 781 aaKnown RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 BASP1P80723 227 aaKnown RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 PSMD2Q13200 908 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 C4orf33Q8N1A6 199 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 P3H4Q92791 437 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
SIN3A-208ENST00000567289 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-208ENST00000567289 FAM205AQ6ZU69 1335 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-208ENST00000567289 RANBP1P43487 201 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 ZNF394Q53GI3 561 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 EPS8L3Q8TE67 593 aaKnown RBP12.6□□□□□ -0.39
SIN3A-208ENST00000567289 GRK7Q8WTQ7 553 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 SMYD3Q9H7B4 428 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 SRP68Q9UHB9 627 aaKnown RBP12.6□□□□□ -0.39
SIN3A-208ENST00000567289 TMEM120BA0PK00 339 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 GRID2IPA4D2P6 1211 aa12.6□□□□□ -0.39
SIN3A-208ENST00000567289 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms