RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 GIT2Q14161 759 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 DHX8Q14562 1220 aaKnown RBP17.22■□□□□ 0.35
SNHG20-204ENST00000566583 POSTNQ15063 836 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 DAW1Q8N136 415 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 LMBR1Q8WVP7 490 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 DDX12PQ92771 950 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 CTAGE1Q96RT6 745 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 GTF2IRD1Q9UHL9 959 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 NRCAMQ92823 1304 aa17.22■□□□□ 0.35
SNHG20-204ENST00000566583 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 RRN3P2A6NIE6 340 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
SNHG20-204ENST00000566583 SSBP05455 408 aaKnown RBP eCLIP17.21■□□□□ 0.357e-20■■■■■ 28.2
SNHG20-204ENST00000566583 SARSP49591 514 aaKnown RBP17.21■□□□□ 0.35
SNHG20-204ENST00000566583 ZNF131P52739 623 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 AMPD3Q01432 767 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 PTPN11Q06124 597 aaPredicted RBP17.21■□□□□ 0.35
SNHG20-204ENST00000566583 EHHADHQ08426 723 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
SNHG20-204ENST00000566583 NT5DC1Q5TFE4 455 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 REEP2Q9BRK0 252 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 LRRC27Q9C0I9 530 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 SETD4Q9NVD3 440 aa17.21■□□□□ 0.35
SNHG20-204ENST00000566583 TFRCP02786 760 aaKnown RBP17.21■□□□□ 0.34
SNHG20-204ENST00000566583 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.34
SNHG20-204ENST00000566583 KLRC1P26715 233 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 CDK7P50613 346 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 ITGA7Q13683 1181 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 EMC2Q15006 297 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 CAMK4Q16566 473 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 MTHFD1LQ6UB35 978 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 ZBTB10Q96DT7 871 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 GLT1D1Q96MS3 346 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 TIPINQ9BVW5 301 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 BLZF1Q9H2G9 400 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 ODF2LQ9ULJ1 636 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 PCDHA5Q9Y5H7 936 aa17.21■□□□□ 0.34
SNHG20-204ENST00000566583 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
SNHG20-204ENST00000566583 RSPH10B2B2RC85 870 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 MAGEB2O15479 319 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 RSPH10BP0C881 870 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 ARL2P36404 184 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
SNHG20-204ENST00000566583 TBC1D8BQ0IIM8 1120 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 COL13A1Q5TAT6 717 aaPredicted RBP17.2■□□□□ 0.34
SNHG20-204ENST00000566583 GDF6Q6KF10 455 aaPredicted RBP17.2■□□□□ 0.34
SNHG20-204ENST00000566583 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
SNHG20-204ENST00000566583 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 MCPH1Q8NEM0 835 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 ERCC4Q92889 916 aaPredicted RBP17.2■□□□□ 0.34
SNHG20-204ENST00000566583 TMEM106CQ9BVX2 250 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 STARD7Q9NQZ5 370 aa17.2■□□□□ 0.34
SNHG20-204ENST00000566583 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 C17orf102A2RUQ5 167 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 TREHO43280 583 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
SNHG20-204ENST00000566583 HIP1RO75146 1068 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 POLGP54098 1239 aaPredicted RBP17.19■□□□□ 0.34
SNHG20-204ENST00000566583 SOX10P56693 466 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 RTP1P59025 263 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 DRP2Q13474 957 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 SNX17Q15036 470 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 UNC13DQ70J99 1090 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 C7orf31Q8N865 590 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 DIS3LQ8TF46 1054 aaKnown RBP17.19■□□□□ 0.34
SNHG20-204ENST00000566583 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 FIZ1Q96SL8 496 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 KIAA1468Q9P260 1216 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
SNHG20-204ENST00000566583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-204ENST00000566583 ARVCFO00192 962 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 IGBP1P78318 339 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 ASIC1P78348 528 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-204ENST00000566583 RAD51AP2Q09MP3 1159 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 KCNB1Q14721 858 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 EFCAB12Q6NXP0 572 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 SLC7A3Q8WY07 619 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
SNHG20-204ENST00000566583 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-204ENST00000566583 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
SNHG20-204ENST00000566583 BMP2KQ9NSY1 1161 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-204ENST00000566583 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
SNHG20-204ENST00000566583 SMIM35A0A1B0GVV1 85 aa17.17■□□□□ 0.34
SNHG20-204ENST00000566583 RHOBTB3O94955 611 aa17.17■□□□□ 0.34
SNHG20-204ENST00000566583 RPN1P04843 607 aaKnown RBP17.17■□□□□ 0.34
SNHG20-204ENST00000566583 GNAT1P11488 350 aa17.17■□□□□ 0.34
SNHG20-204ENST00000566583 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms