RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 VCPKMTQ9H867 229 aa10.17□□□□□ -0.78
BBS4-210ENST00000566400 GINM1Q9NU53 330 aa10.17□□□□□ -0.78
BBS4-210ENST00000566400 SALL4Q9UJQ4 1053 aa10.17□□□□□ -0.78
BBS4-210ENST00000566400 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 PPIP5K2O43314 1243 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 KIF4AO95239 1232 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 SLC9A1P19634 815 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 HOXA13P31271 388 aaPredicted RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 CXCR5P32302 372 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 MATR3P43243 847 aaKnown RBP eCLIP10.16□□□□□ -0.78
BBS4-210ENST00000566400 NOP2P46087 812 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 ARID5AQ03989 594 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 DLGAP5Q15398 846 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 RSBN1LQ6PCB5 846 aaPredicted RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 ZNF720Q7Z2F6 126 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 ZNF571Q7Z3V5 609 aaPredicted RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 FAM83AQ86UY5 434 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 USP38Q8NB14 1042 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 PRMT6Q96LA8 375 aaPredicted RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 INPP4AQ96PE3 977 aaPredicted RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 RBM12Q9NTZ6 932 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 LARSQ9P2J5 1176 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 SUCLA2Q9P2R7 463 aaPredicted RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 DMGDHQ9UI17 866 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 ZBTB21Q9ULJ3 1066 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 ARHGEF35A5YM69 484 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 PGRMC1O00264 195 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 MAPK13O15264 365 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 HEXIM1O94992 359 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 KRT13P13646 458 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 HOXD13P35453 343 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 SOX5P35711 763 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 DPY19L2P1Q6NXN4 242 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 C7orf43Q8WVR3 580 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 BORCS6Q96GS4 357 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 DYDC2Q96IM9 177 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
BBS4-210ENST00000566400 TMEM59LQ9UK28 342 aa10.16□□□□□ -0.78
BBS4-210ENST00000566400 EML1O00423 815 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 TGFB1I1O43294 461 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 NCK2O43639 380 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 SHOX2O60902 331 aaPredicted RBP10.15□□□□□ -0.78
BBS4-210ENST00000566400 PHACTR2O75167 634 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 ZMYND10O75800 440 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 ASNSP08243 561 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 FMO5P49326 533 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 CTTNQ14247 550 aaKnown RBP10.15□□□□□ -0.78
BBS4-210ENST00000566400 INTS8Q75QN2 995 aaKnown RBP10.15□□□□□ -0.78
BBS4-210ENST00000566400 PEX26Q7Z412 305 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 MAATS1Q7Z4T9 603 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 SLFN11Q7Z7L1 901 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 CD302Q8IX05 232 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 MTMR14Q8NCE2 650 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 CCDC26Q8TAB7 109 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 LRRC45Q96CN5 670 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 PSMD1Q99460 953 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 MXRA8Q9BRK3 442 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 SLITRK6Q9H5Y7 841 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 DMAC2Q9NW81 257 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 NENFQ9UMX5 172 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 SLX4Q8IY92 1834 aa10.15□□□□□ -0.78
BBS4-210ENST00000566400 RSPH10B2B2RC85 870 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 KCNK3O14649 394 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 PPFIA4O75335 1185 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 FTCDO95954 541 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
BBS4-210ENST00000566400 TMEM253P0C7T8 217 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 RSPH10BP0C881 870 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 MYBL2P10244 700 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 GYS2P54840 703 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 SNAP25P60880 206 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 SPDYE2Q495Y8 402 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 ODR4Q5SWX8 454 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 CFAP58Q5T655 872 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 C12orf56Q8IXR9 622 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 SYCP3Q8IZU3 236 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 PSMB7Q99436 277 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.14□□□□□ -0.795e-7■□□□□ 10.6
BBS4-210ENST00000566400 WDR18Q9BV38 432 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 SIX2Q9NPC8 291 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 APEX2Q9UBZ4 518 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 ZNF70Q9UC06 446 aaPredicted RBP10.14□□□□□ -0.79
BBS4-210ENST00000566400 DBR1Q9UK59 544 aaKnown RBP10.14□□□□□ -0.79
BBS4-210ENST00000566400 TTC7AQ9ULT0 858 aaPredicted RBP10.14□□□□□ -0.79
BBS4-210ENST00000566400 PCDHAC2Q9Y5I4 1007 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 PSME4Q14997 1843 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 PFASO15067 1338 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 GOLGA6L10A6NI86 522 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 AGPSO00116 658 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 IPO5O00410 1097 aaKnown RBP10.14□□□□□ -0.79
BBS4-210ENST00000566400 ICAM1P05362 532 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 FDX1P10109 184 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 ACTN1P12814 892 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 HSD17B4P51659 736 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 GHRHRQ02643 423 aa10.14□□□□□ -0.79
BBS4-210ENST00000566400 MTMR3Q13615 1198 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms