RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SUMO1P63165 101 aaKnown RBP3.79□□□□□ -1.8
SMG1-212ENST00000566328 GABREP78334 506 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 FSTL1Q12841 308 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 HNRNPA0Q13151 305 aaKnown RBP3.79□□□□□ -1.8
SMG1-212ENST00000566328 KLHDC10Q6PID8 442 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 LRSAM1Q6UWE0 723 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 ZC3H7AQ8IWR0 971 aaKnown RBP3.79□□□□□ -1.8
SMG1-212ENST00000566328 GFM2Q969S9 779 aaKnown RBP3.79□□□□□ -1.8
SMG1-212ENST00000566328 SPATA9Q9BWV2 254 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 SLC6A15Q9H2J7 730 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 SH3BP1Q9Y3L3 701 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 ASB1Q9Y576 335 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 PCSK5Q92824 1860 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 TRBV23-1A0A0A0MS06 115 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 GOLGA8BA8MQT2 603 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 KLF4O43474 513 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 GCP02774 474 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 MMEP08473 750 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 LMO1P25800 156 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 DNM2P50570 870 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 SCNN1GP51170 649 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 ADCY7P51828 1080 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 SMAD3P84022 425 aaKnown RBP3.78□□□□□ -1.8
SMG1-212ENST00000566328 ADAM15Q13444 863 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 RPUSD2Q8IZ73 545 aaKnown RBP3.78□□□□□ -1.8
SMG1-212ENST00000566328 SYNE4Q8N205 404 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 ASB15Q8WXK1 588 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 GCDHQ92947 438 aaPredicted RBP3.78□□□□□ -1.8
SMG1-212ENST00000566328 SLC7A6OSQ96CW6 309 aaPredicted RBP3.78□□□□□ -1.8
SMG1-212ENST00000566328 GBP4Q96PP9 640 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 TRIM55Q9BYV6 548 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 NRDE2Q9H7Z3 1164 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 SMURF1Q9HCE7 757 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 KCNH7Q9NS40 1196 aa3.78□□□□□ -1.8
SMG1-212ENST00000566328 HECAQ9UBI9 543 aaPredicted RBP3.78□□□□□ -1.8
SMG1-212ENST00000566328 CTDP1Q9Y5B0 961 aaPredicted RBP3.78□□□□□ -1.8
SMG1-212ENST00000566328 XDHP47989 1333 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 PRAMEF22A3QJZ6 481 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 SCDO00767 359 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 FOXP2O15409 715 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 FBLP22087 321 aaKnown RBP3.77□□□□□ -1.81
SMG1-212ENST00000566328 ATP2C1P98194 919 aaPredicted RBP3.77□□□□□ -1.81
SMG1-212ENST00000566328 SLC25A3Q00325 362 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 RAB33AQ14088 237 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 TOB2Q14106 344 aaPredicted RBP3.77□□□□□ -1.81
SMG1-212ENST00000566328 FAM111BQ6SJ93 734 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 Q6ZPA2 131 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 SLC25A43Q8WUT9 341 aaPredicted RBP3.77□□□□□ -1.81
SMG1-212ENST00000566328 GPR87Q9BY21 358 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 GPRC5BQ9NZH0 403 aa3.77□□□□□ -1.81
SMG1-212ENST00000566328 SAE1Q9UBE0 346 aaPredicted RBP3.77□□□□□ -1.81
SMG1-212ENST00000566328 UNCXA6NJT0 531 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 GOLGA6L6A8MZA4 724 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 GOLGA6L22H0YM25 854 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 KCNK3O14649 394 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 HIP1RO75146 1068 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 RPS6KA4O75676 772 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 SDHAP31040 664 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 ADRA1BP35368 520 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 COL10A1Q03692 680 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 SAFB2Q14151 953 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMG1-212ENST00000566328 PTPAQ15257 358 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 ELAVL1Q15717 326 aaKnown RBP3.76□□□□□ -1.81
SMG1-212ENST00000566328 CCDC142Q17RM4 750 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 GAGE13Q4V321 117 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 MFSD5Q6N075 450 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 Q6ZRM9 215 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 GAREM2Q75VX8 874 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 MRGPREQ86SM8 312 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 ZBTB38Q8NAP3 1195 aaPredicted RBP3.76□□□□□ -1.81
SMG1-212ENST00000566328 E2F7Q96AV8 911 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 PACSIN3Q9UKS6 424 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 DENND2AQ9ULE3 1009 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 PCDHA9Q9Y5H5 950 aa3.76□□□□□ -1.81
SMG1-212ENST00000566328 MFAP3LO75121 409 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 CRTAMO95727 393 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 NUDT3O95989 172 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 ATXN1P54253 815 aaKnown RBP3.75□□□□□ -1.81
SMG1-212ENST00000566328 BPIFB4P59827 614 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 MRPS21P82921 87 aaKnown RBP3.75□□□□□ -1.81
SMG1-212ENST00000566328 SEC23AQ15436 765 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 MTERF2Q49AM1 385 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 RABL3Q5HYI8 236 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 LY6G5CQ5SRR4 150 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 NOSTRINQ8IVI9 506 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 ZNF276Q8N554 614 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 SLC43A3Q8NBI5 491 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 LENG9Q96B70 501 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 RPL10LQ96L21 214 aaKnown RBP3.75□□□□□ -1.81
SMG1-212ENST00000566328 GMLQ99445 158 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 TCF25Q9BQ70 676 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 TINF2Q9BSI4 451 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 RIOX1Q9H6W3 641 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 RCAN3Q9UKA8 241 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 RBM8AQ9Y5S9 174 aaKnown RBP3.75□□□□□ -1.81
SMG1-212ENST00000566328 B3GALT1Q9Y5Z6 326 aa3.75□□□□□ -1.81
SMG1-212ENST00000566328 PDPK1O15530 556 aa3.74□□□□□ -1.81
SMG1-212ENST00000566328 ADCY3O60266 1144 aa3.74□□□□□ -1.81
SMG1-212ENST00000566328 EFCAB14O75071 495 aa3.74□□□□□ -1.81
SMG1-212ENST00000566328 IPO13O94829 963 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms