RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, human

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN3-215	ENST00000565559	WEE2	P0C1S8	567 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	SP9	P0CG40	484 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	FECH	P22830	423 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	PPM1A	P35813	382 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	DMWD	Q09019	674 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	SMC1A	Q14683	1233 aa	Known RBP	12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	BMS1	Q14692	1282 aa	Known RBP	12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	STOX1	Q6ZVD7	989 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	OTOP3	Q7RTS5	596 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	TMEM87A	Q8NBN3	555 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	BORCS6	Q96GS4	357 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	TYW1	Q9NV66	732 aa	Known RBP	12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	PLXNA4	Q9HCM2	1894 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	MYH7B	A7E2Y1	1941 aa		12.86	□□□□□ -0.35
CAPN3-215	ENST00000565559	MYO10	Q9HD67	2058 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	ANKRD11	Q6UB99	2663 aa	Predicted RBP	12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	CA8	P35219	290 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	IRX6	P78412	446 aa	Predicted RBP	12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	NONO	Q15233	471 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	GRIK4	Q16099	956 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	SPECC1	Q5M775	1068 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	SAMD3	Q8N6K7	520 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	AMN	Q9BXJ7	453 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	WNT16	Q9UBV4	365 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	PCDHA1	Q9Y5I3	950 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	TRPV2	Q9Y5S1	764 aa		12.85	□□□□□ -0.35
CAPN3-215	ENST00000565559	DENND3	A2RUS2	1198 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	DCDC2B	A2VCK2	349 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	GPR37	O15354	613 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	STAM2	O75886	525 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	AR	P10275	920 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	HOXA13	P31271	388 aa	Predicted RBP	12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	SP4	Q02446	784 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	GHRHR	Q02643	423 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	ZMYM1	Q5SVZ6	1142 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	CCDC149	Q6ZUS6	474 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	C1orf210	Q8IVY1	113 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	SUMF1	Q8NBK3	374 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	TTC13	Q8NBP0	860 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	IL31RA	Q8NI17	732 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	RNF166	Q96A37	237 aa	Predicted RBP	12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	BCAS3	Q9H6U6	928 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	KCNK12	Q9HB15	430 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	VAT1L	Q9HCJ6	419 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	C1orf112	Q9NSG2	853 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	IGSF9	Q9P2J2	1179 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	IGSF9B	Q9UPX0	1349 aa		12.84	□□□□□ -0.35
CAPN3-215	ENST00000565559	GPR179	Q6PRD1	2367 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	SPATA31C2	B4DYI2	1134 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	SPTLC1	O15269	473 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	FIBP	O43427	364 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	SMARCA5	O60264	1052 aa	Predicted RBP	12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	CFH	P08603	1231 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	NFX1	Q12986	1120 aa	Known RBP	12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	ASPRV1	Q53RT3	343 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	NUDT18	Q6ZVK8	323 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	SMC5	Q8IY18	1101 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	MRPL43	Q8N983	215 aa	Known RBP	12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	TATDN2	Q93075	761 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	TBC1D17	Q9HA65	648 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	ATP6V0A4	Q9HBG4	840 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	ERAP1	Q9NZ08	941 aa		12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	RALY	Q9UKM9	306 aa	Known RBP	12.83	□□□□□ -0.36
CAPN3-215	ENST00000565559	C2orf71	A6NGG8	1288 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	GOLGA8CP	A6NN73	597 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	CLASP2	O75122	1294 aa	Known RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	MARK3	P27448	753 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	TCF7	P36402	384 aa	Predicted RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	IGBP1	P78318	339 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	ODR4	Q5SWX8	454 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	FAM102B	Q5T8I3	360 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	TSHZ3	Q63HK5	1081 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	SLC24A5	Q71RS6	500 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	FCHSD1	Q86WN1	690 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	DGKH	Q86XP1	1220 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	C12orf76	Q8N812	135 aa	Predicted RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	PNMA1	Q8ND90	353 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	GLG1	Q92896	1179 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	TNPO1	Q92973	898 aa	Known RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	KCTD12	Q96CX2	325 aa	Known RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	ZNF558	Q96NG5	402 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	CELF4	Q9BZC1	486 aa	Known RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	CWH43	Q9H720	699 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	HCST	Q9UBK5	93 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	USP18	Q9UMW8	372 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	SIT1	Q9Y3P8	196 aa		12.82	□□□□□ -0.36
CAPN3-215	ENST00000565559	RRN3P2	A6NIE6	340 aa		12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	OPLAH	O14841	1288 aa		12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	FOXP2	O15409	715 aa		12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	IGHD	P01880	384 aa		12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	DCN	P07585	359 aa	Known RBP	12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	POLR2M	P0CAP2	368 aa		12.81	□□□□□ -0.36
CAPN3-215	ENST00000565559	PC	P11498	1178 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms