RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TMEM150BA6NC51 233 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 GRM6O15303 877 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 MAGEB2O15479 319 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 STBD1O95210 358 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 SEC24BO95487 1268 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 BMPR1AP36894 532 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 ME3Q16798 604 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 LETM2Q2VYF4 491 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 EARS2Q5JPH6 523 aaKnown RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 EFCAB12Q6NXP0 572 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 MIER3Q7Z3K6 550 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 RDM1Q8NG50 284 aa11.31□□□□□ -0.6
CMTM3-209ENST00000565003 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 ORC3Q9UBD5 711 aaPredicted RBP11.31□□□□□ -0.6
CMTM3-209ENST00000565003 KIAA1671Q9BY89 1806 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.3□□□□□ -0.6
CMTM3-209ENST00000565003 CCDC194A0A1B0GVG4 234 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 C9IYK1 514 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 EML1O00423 815 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 GPR182O15218 404 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 RB1P06400 928 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 XBP1P17861 261 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 IBSPP21815 317 aaPredicted RBP11.3□□□□□ -0.6
CMTM3-209ENST00000565003 SARSP49591 514 aaKnown RBP11.3□□□□□ -0.6
CMTM3-209ENST00000565003 DRP2Q13474 957 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
CMTM3-209ENST00000565003 TIGD5Q53EQ6 642 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 TCEAL5Q5H9L2 206 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 PIK3AP1Q6ZUJ8 805 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 ZNF668Q96K58 619 aaPredicted RBP11.3□□□□□ -0.6
CMTM3-209ENST00000565003 CEP89Q96ST8 783 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 MAP7D2Q96T17 732 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 ADAM2Q99965 735 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 SH2D3AQ9BRG2 576 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 C11orf84Q9BUA3 381 aaPredicted RBP11.3□□□□□ -0.6
CMTM3-209ENST00000565003 ADAMTS10Q9H324 1103 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 RGS18Q9NS28 235 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 NRBP2Q9NSY0 501 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 VAV3Q9UKW4 847 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 AKT3Q9Y243 479 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 RWDD3Q9Y3V2 267 aa11.3□□□□□ -0.6
CMTM3-209ENST00000565003 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 CSPG5O95196 566 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 GCFC2P16383 781 aaKnown RBP11.29□□□□□ -0.6
CMTM3-209ENST00000565003 KCNA5P22460 613 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 GPC3P51654 580 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 NLRP11P59045 1033 aaKnown RBP11.29□□□□□ -0.6
CMTM3-209ENST00000565003 TBC1D8BQ0IIM8 1120 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 NR5A1Q13285 461 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 DSC3Q14574 896 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 XKR3Q5GH77 459 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 ODR4Q5SWX8 454 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 SLC24A5Q71RS6 500 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
CMTM3-209ENST00000565003 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 PLVAPQ9BX97 442 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
CMTM3-209ENST00000565003 NSUN3Q9H649 340 aaKnown RBP11.29□□□□□ -0.6
CMTM3-209ENST00000565003 C1orf112Q9NSG2 853 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
CMTM3-209ENST00000565003 LRFN2Q9ULH4 789 aa11.29□□□□□ -0.6
CMTM3-209ENST00000565003 FNDC1Q4ZHG4 1894 aaPredicted RBP11.28□□□□□ -0.6
CMTM3-209ENST00000565003 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
CMTM3-209ENST00000565003 JAK2O60674 1132 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 MMP1P03956 469 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 FGFR1P11362 822 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 DNAJB1P25685 340 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 TMOD1P28289 359 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 NEK4P51957 841 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 CAMK1Q14012 370 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 FAM102BQ5T8I3 360 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 FAM43BQ6ZT52 329 aaPredicted RBP11.28□□□□□ -0.6
CMTM3-209ENST00000565003 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.28□□□□□ -0.6
CMTM3-209ENST00000565003 WASF1Q92558 559 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 HAS1Q92839 578 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 LMAN2LQ9H0V9 348 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
CMTM3-209ENST00000565003 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
CMTM3-209ENST00000565003 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
CMTM3-209ENST00000565003 IGKV6-21A0A0C4DH24 114 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms