RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ARSHQ5FYA8 562 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 PADI6Q6TGC4 694 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
SPG7-209ENST00000564047 RNF180Q86T96 592 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
SPG7-209ENST00000564047 GSDMAQ96QA5 445 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 TIPINQ9BVW5 301 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 RNPEPQ9H4A4 650 aa14.34□□□□□ -0.11
SPG7-209ENST00000564047 PVALEFA0A1B0GWK0 134 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 HAS3O00219 553 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 DGAT1O75907 488 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 RPN1P04843 607 aaKnown RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 RFC5P40937 340 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 ASIC1P78348 528 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 GIT2Q14161 759 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 KCNB1Q14721 858 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 MTERF2Q49AM1 385 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 ZNF484Q5JVG2 852 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 CCSAPQ6IQ19 270 aaPredicted RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 UNC13DQ70J99 1090 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 DYMQ7RTS9 669 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 GAS2L3Q86XJ1 694 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 KAT2BQ92831 832 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 DNAJC19Q96DA6 116 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 CEP89Q96ST8 783 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 MTG1Q9BT17 334 aaPredicted RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 COL25A1Q9BXS0 654 aaPredicted RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 PAK6Q9NQU5 681 aaPredicted RBP14.33□□□□□ -0.12
SPG7-209ENST00000564047 RMND1Q9NWS8 449 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 ODF2LQ9ULJ1 636 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 TRPC6Q9Y210 931 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 COL1A2P08123 1366 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 ALPK3Q96L96 1907 aa14.33□□□□□ -0.12
SPG7-209ENST00000564047 SPTBN5Q9NRC6 3674 aaKnown RBP14.32□□□□□ -0.12
SPG7-209ENST00000564047 SYCE3A1L190 88 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 KLRC4O43908 158 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 USO1O60763 962 aaKnown RBP14.32□□□□□ -0.12
SPG7-209ENST00000564047 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
SPG7-209ENST00000564047 BMP8BP34820 402 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 PSEN2P49810 448 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 MFSD10Q14728 455 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 LRRC41Q15345 812 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 SASS6Q6UVJ0 657 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 CCDC65Q8IXS2 484 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 TRIML1Q8N9V2 468 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 ARRDC4Q8NCT1 418 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
SPG7-209ENST00000564047 SH2D3AQ9BRG2 576 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 REEP2Q9BRK0 252 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 PDLIM7Q9NR12 457 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 PRUNE2Q8WUY3 3088 aa14.32□□□□□ -0.12
SPG7-209ENST00000564047 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 MOXD2PA6NHM9 499 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 RRN3P2A6NIE6 340 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 MAFO75444 373 aaPredicted RBP14.31□□□□□ -0.12
SPG7-209ENST00000564047 CABYRO75952 493 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 ASGR1P07306 291 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 INSRRP14616 1297 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 IDEP14735 1019 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 KCNA10Q16322 511 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 KIAA0753Q2KHM9 967 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 KMT5BQ4FZB7 885 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 SLC7A3Q8WY07 619 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 JPH2Q9BR39 696 aaPredicted RBP14.31□□□□□ -0.12
SPG7-209ENST00000564047 TSEN34Q9BSV6 310 aaKnown RBP14.31□□□□□ -0.12
SPG7-209ENST00000564047 GTPBP4Q9BZE4 634 aaKnown RBP14.31□□□□□ -0.12
SPG7-209ENST00000564047 DHX33Q9H6R0 707 aaKnown RBP14.31□□□□□ -0.12
SPG7-209ENST00000564047 ATP6V0A4Q9HBG4 840 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 PANK4Q9NVE7 773 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 MAN1B1Q9UKM7 699 aa14.31□□□□□ -0.12
SPG7-209ENST00000564047 ZBTB42B2RXF5 422 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 MAGEB2O15479 319 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
SPG7-209ENST00000564047 TBCAO75347 108 aaKnown RBP14.3□□□□□ -0.12
SPG7-209ENST00000564047 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 CCDC192P0DO97 292 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 GAP43P17677 238 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 POLGP54098 1239 aaPredicted RBP14.3□□□□□ -0.12
SPG7-209ENST00000564047 EHHADHQ08426 723 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 RAD51AP2Q09MP3 1159 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 PPFIA1Q13136 1202 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 MORC3Q14149 939 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 EMC2Q15006 297 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 Q7L0L9 218 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 DRC1Q96MC2 740 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 GDF15Q99988 308 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 FUCA2Q9BTY2 467 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 XPNPEP1Q9NQW7 623 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 EXOC1Q9NV70 894 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 COL4A3BPQ9Y5P4 624 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms