RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 USP28Q96RU2 1077 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 SH2D3AQ9BRG2 576 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 CELF4Q9BZC1 486 aaKnown RBP9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 RAB34Q9BZG1 259 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 ADAMTS10Q9H324 1103 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 XPNPEP1Q9NQW7 623 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 ANKEF1Q9NU02 776 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 ZDHHC9Q9Y397 364 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 TRPV2Q9Y5S1 764 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 SQORQ9Y6N5 450 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 CHD9Q3L8U1 2897 aa9.86□□□□□ -0.83
NSMCE1-206ENST00000563900 MICAL3Q7RTP6 2002 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 PP2D1A8MPX8 630 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 SOX1O00570 391 aaPredicted RBP9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 BAIAP3O94812 1187 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 BRD1O95696 1058 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 F13A1P00488 732 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 RFC5P40937 340 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 FXR1P51114 621 aaKnown RBP eCLIP9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 GRIN1Q05586 938 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 C1QBPQ07021 282 aaKnown RBP9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 IER5Q5VY09 327 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 POTEGQ6S5H5 508 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 TSHZ1Q6ZSZ6 1077 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 OTOP2Q7RTS6 562 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 ZNF710Q8N1W2 664 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 LRRC71Q8N4P6 559 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 SPRYD3Q8NCJ5 442 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 DBF4BQ8NFT6 615 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 SNX29Q8TEQ0 813 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 TMEM40Q8WWA1 233 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 CEP170P1Q96L14 293 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 RNPC3Q96LT9 517 aaKnown RBP9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 AGO3Q9H9G7 860 aaKnown RBP9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 LRWD1Q9UFC0 647 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 DBR1Q9UK59 544 aaKnown RBP9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 CLIC4Q9Y696 253 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 PTPRSQ13332 1948 aa9.85□□□□□ -0.83
NSMCE1-206ENST00000563900 ABHD14A-ACY1A0A1B0GW23 586 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 VWA3AA6NCI4 1184 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 GAS2O43903 313 aaKnown RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 VTNP04004 478 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 GHRP10912 638 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 TMOD1P28289 359 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 CDC25AP30304 524 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 GPC3P51654 580 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 CRYBB1P53674 252 aaPredicted RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 TMEM62Q0P6H9 643 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 BECN1Q14457 450 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 EMC2Q15006 297 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 SLC39A14Q15043 492 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 FAM109BQ6ICB4 259 aaPredicted RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 FAM43BQ6ZT52 329 aaPredicted RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 OTUD6AQ7L8S5 288 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 KCTD17Q8N5Z5 321 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 METTL13Q8N6R0 699 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 USP38Q8NB14 1042 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 LINC00301Q8NCQ3 95 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 PIGOQ8TEQ8 1089 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 SLC7A3Q8WY07 619 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 AK8Q96MA6 479 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 NACC1Q96RE7 527 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 JPH2Q9BR39 696 aaPredicted RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 IFIH1Q9BYX4 1025 aaKnown RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 FBXO2Q9UK22 296 aaPredicted RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 SRPRBQ9Y5M8 271 aaKnown RBP9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 LOXHD1Q8IVV2 1947 aa9.84□□□□□ -0.83
NSMCE1-206ENST00000563900 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 M0QZ92 97 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 SLC26A4O43511 780 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 EFCAB14O75071 495 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 DGAT1O75907 488 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 ACTN1P12814 892 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 LONP1P36776 959 aaKnown RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 CCT6AP40227 531 aaKnown RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 POLGP54098 1239 aaPredicted RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 WDR5P61964 334 aaKnown RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 SMAD3P84022 425 aaKnown RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 GRB10Q13322 594 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 KIZQ2M2Z5 673 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 TMEM119Q4V9L6 283 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 XKR9Q5GH70 373 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 KRT79Q5XKE5 535 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 KCNK18Q7Z418 384 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 ZNF410Q86VK4 478 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 EXOC8Q8IYI6 725 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 LRRC15Q8TF66 581 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 LINC01599Q8WXQ3 324 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 SEPT8Q92599 483 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 APBB2Q92870 758 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 MAP7D2Q96T17 732 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 OSMRQ99650 979 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 MTIF3Q9H2K0 278 aaKnown RBP9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 SUGCTQ9HAC7 445 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 ERVK-5Q9HDB9 667 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 KIAA1024Q9UPX6 916 aa9.83□□□□□ -0.84
NSMCE1-206ENST00000563900 AKT3Q9Y243 479 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms