RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RBM10P98175 930 aaKnown RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 COASYQ13057 564 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 PRR16Q569H4 304 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 HERC4Q5GLZ8 1057 aaPredicted RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 REXO1Q8N1G1 1221 aaKnown RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 LINC01465Q8N7H1 131 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 VN1R2Q8NFZ6 395 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 PHKBQ93100 1093 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 PPP2R3CQ969Q6 453 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 POP1Q99575 1024 aaKnown RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 UPF3BQ9BZI7 483 aaKnown RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 CWH43Q9H720 699 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 C6orf50Q9HD87 102 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 TYW1Q9NV66 732 aaKnown RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 GABBR1Q9UBS5 961 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 PER2O15055 1255 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 CIITAP33076 1130 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 ERVFC1P60507 584 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 FGD1P98174 961 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 SETQ01105 290 aaPredicted RBP19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 NTRK3Q16288 839 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 SPOUT1Q5T280 376 aaKnown RBP19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 HFE2Q6ZVN8 426 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 SMAP1Q8IYB5 467 aaPredicted RBP19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 METTL13Q8N6R0 699 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 COLGALT1Q8NBJ5 622 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 JAKMIP1Q96N16 626 aaKnown RBP19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 RNF19AQ9NV58 838 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 PCDHB12Q9Y5F1 795 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 PCDHA10Q9Y5I2 948 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 SNX14Q9Y5W7 946 aa19.04■□□□□ 0.64
HDGFL3-203ENST00000563404 CCDC196A0A1B0GTZ2 297 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 ZNF862O60290 1169 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 FGF18O76093 207 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 PSAPP07602 524 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 LRRC55Q6ZSA7 311 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 FAM43BQ6ZT52 329 aaPredicted RBP19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 ADAMTS10Q9H324 1103 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 TLE6Q9H808 572 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 TLR9Q9NR96 1032 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 TMEM161AQ9NX61 479 aa19.03■□□□□ 0.64
HDGFL3-203ENST00000563404 LOC730098B7Z3J9 87 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 FSCN2O14926 492 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 HSPA4P34932 840 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 UBE3AQ05086 875 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 ODR4Q5SWX8 454 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 MCTP2Q6DN12 878 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 FBXL16Q8N461 479 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 LRRC71Q8N4P6 559 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 CCDC12Q8WUD4 166 aaPredicted RBP19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 ZNF668Q96K58 619 aaPredicted RBP19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 CASD1Q96PB1 797 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 AGXT2Q9BYV1 514 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 ELAC1Q9H777 363 aaKnown RBP19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 ATP6V0A4Q9HBG4 840 aa19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 USP15Q9Y4E8 981 aaPredicted RBP19.02■□□□□ 0.64
HDGFL3-203ENST00000563404 MYH9P35579 1960 aaKnown RBP19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 TECTAO75443 2155 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 MSH4O15457 936 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 RPS6KB1P23443 525 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 GNA11P29992 359 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 NLRP11P59045 1033 aaKnown RBP19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 UGCGQ16739 394 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 DUSP6Q16828 381 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 EFCAB12Q6NXP0 572 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 ALYREFQ86V81 257 aaKnown RBP19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 THNSL1Q8IYQ7 743 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 MICAL1Q8TDZ2 1067 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 GJA10Q969M2 543 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 FBXL18Q96ME1 805 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 AAASQ9NRG9 546 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 VPS54Q9P1Q0 977 aa19.01■□□□□ 0.63
HDGFL3-203ENST00000563404 PIEZO1Q92508 2521 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 MAGEB2O15479 319 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 KCNC3Q14003 757 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 CBX2Q14781 532 aaPredicted RBP19■□□□□ 0.63
HDGFL3-203ENST00000563404 BLOC1S2Q6QNY1 142 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 EDAQ92838 391 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 SLC26A6Q9BXS9 759 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 NCOA5Q9HCD5 579 aaKnown RBP19■□□□□ 0.63
HDGFL3-203ENST00000563404 DISC1Q9NRI5 854 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
HDGFL3-203ENST00000563404 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 AKT3Q9Y243 479 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 SAMM50Q9Y512 469 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 ZNF318Q5VUA4 2279 aa19■□□□□ 0.63
HDGFL3-203ENST00000563404 WDR64B1ANS9 1081 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 OATP04181 439 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 IFNAR1P17181 557 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 PBX3P40426 434 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 CCT2P78371 535 aaKnown RBP18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 PRKCEQ02156 737 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 SUSD6Q92537 303 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 FAM167AQ96KS9 214 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 RNF26Q9BY78 433 aaPredicted RBP18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 TMEM117Q9H0C3 514 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 TCEAL9Q9UHQ7 104 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 WDR81Q562E7 1941 aa18.99■□□□□ 0.63
HDGFL3-203ENST00000563404 LAG3P18627 525 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms