RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RALGAPA2Q2PPJ7 1873 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 WNT7AO00755 349 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 GPR37L1O60883 481 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 AMHP03971 560 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 CTSHP09668 335 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 IL9P15248 144 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 HOXD11P31277 338 aaPredicted RBP18.61■□□□□ 0.57
CDT1-202ENST00000562747 LEXMQ3ZCV2 418 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 FAM26DQ5JW98 314 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 TRAPPC12Q8WVT3 735 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 NRBP2Q9NSY0 501 aa18.61■□□□□ 0.57
CDT1-202ENST00000562747 NOL7Q9UMY1 257 aaKnown RBP18.61■□□□□ 0.57
CDT1-202ENST00000562747 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 PI4K2BG5E9Z4 385 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 EML1O00423 815 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 ZNF862O60290 1169 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 OATP04181 439 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 PRKCEQ02156 737 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 UGCGQ16739 394 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 EPC2Q52LR7 807 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 DNAJB3Q8WWF6 145 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 MTMR9Q96QG7 549 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 PCDHA12Q9UN75 941 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 HCN4Q9Y3Q4 1203 aa18.6■□□□□ 0.57
CDT1-202ENST00000562747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.59■□□□□ 0.57
CDT1-202ENST00000562747 ZBTB42B2RXF5 422 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 H3BQV1 296 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 K7ELQ4 463 aaPredicted RBP18.59■□□□□ 0.57
CDT1-202ENST00000562747 DKC1O60832 514 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDT1-202ENST00000562747 ATP2B1P20020 1258 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 KLRC1P26715 233 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 MCM7P33993 719 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 PSMC5P62195 406 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 SPIRE1Q08AE8 756 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 EPHA7Q15375 998 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 NME8Q8N427 588 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 SNX21Q969T3 373 aa18.59■□□□□ 0.57
CDT1-202ENST00000562747 MRPL38Q96DV4 380 aaKnown RBP18.59■□□□□ 0.57
CDT1-202ENST00000562747 MAGEB2O15479 319 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 P4HBP07237 508 aaKnown RBP18.58■□□□□ 0.56
CDT1-202ENST00000562747 MGAT3Q09327 533 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 XKR3Q5GH77 459 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 TTC38Q5R3I4 469 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 LARP1BQ659C4 914 aaKnown RBP18.58■□□□□ 0.56
CDT1-202ENST00000562747 MCTP1Q6DN14 999 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 NCAPH2Q6IBW4 605 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 TRMT1LQ7Z2T5 733 aaKnown RBP18.58■□□□□ 0.56
CDT1-202ENST00000562747 BANK1Q8NDB2 785 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 ZBTB10Q96DT7 871 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 INTS4Q96HW7 963 aaKnown RBP18.58■□□□□ 0.56
CDT1-202ENST00000562747 TMEM60Q9H2L4 133 aa18.58■□□□□ 0.56
CDT1-202ENST00000562747 TTC12Q9H892 705 aaPredicted RBP18.58■□□□□ 0.56
CDT1-202ENST00000562747 ARIH1Q9Y4X5 557 aaPredicted RBP18.58■□□□□ 0.56
CDT1-202ENST00000562747 H3BQ06 376 aaPredicted RBP18.57■□□□□ 0.56
CDT1-202ENST00000562747 UPP2O95045 317 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 C22orf31O95567 290 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 CHRNA1P02708 482 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 TXKP42681 527 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 QARSP47897 775 aaKnown RBP18.57■□□□□ 0.56
CDT1-202ENST00000562747 MRPS6P82932 125 aaKnown RBP18.57■□□□□ 0.56
CDT1-202ENST00000562747 ZNF174Q15697 407 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 IER5Q5VY09 327 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 PTCRAQ6ISU1 281 aaPredicted RBP18.57■□□□□ 0.56
CDT1-202ENST00000562747 GJD3Q8N144 294 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 NEK9Q8TD19 979 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 SEPT8Q92599 483 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 TOP1MTQ969P6 601 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 YME1L1Q96TA2 773 aa18.57■□□□□ 0.56
CDT1-202ENST00000562747 NIFKQ9BYG3 293 aaKnown RBP18.57■□□□□ 0.56
CDT1-202ENST00000562747 FAM49AQ9H0Q0 323 aaPredicted RBP18.57■□□□□ 0.56
CDT1-202ENST00000562747 GRXCR2A6NFK2 248 aa18.56■□□□□ 0.56
CDT1-202ENST00000562747 H3BNC9 293 aa18.56■□□□□ 0.56
CDT1-202ENST00000562747 M0QZ92 97 aa18.56■□□□□ 0.56
CDT1-202ENST00000562747 STBD1O95210 358 aa18.56■□□□□ 0.56
CDT1-202ENST00000562747 PDCP20941 246 aa18.56■□□□□ 0.56
CDT1-202ENST00000562747 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
CDT1-202ENST00000562747 CDY2AQ9Y6F7 541 aa18.56■□□□□ 0.56
CDT1-202ENST00000562747 OR52Z1P0C646 297 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 TOB1P50616 345 aaPredicted RBP18.55■□□□□ 0.56
CDT1-202ENST00000562747 GPM6BQ13491 265 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 TARBP2Q15633 366 aaKnown RBP18.55■□□□□ 0.56
CDT1-202ENST00000562747 TIGD5Q53EQ6 642 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 RILPL1Q5EBL4 403 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 TCEAL5Q5H9L2 206 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 C4orf19Q8IY42 314 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 TMEM192Q8IY95 271 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 KIAA0319LQ8IZA0 1049 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 APBB2Q92870 758 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 SAMD11Q96NU1 681 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 LXNQ9BS40 222 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 TRPV2Q9Y5S1 764 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 SQORQ9Y6N5 450 aa18.55■□□□□ 0.56
CDT1-202ENST00000562747 KDM3AQ9Y4C1 1321 aa18.54■□□□□ 0.56
CDT1-202ENST00000562747 LINC00271P0C7V0 271 aa18.54■□□□□ 0.56
CDT1-202ENST00000562747 TMOD1P28289 359 aa18.54■□□□□ 0.56
CDT1-202ENST00000562747 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
CDT1-202ENST00000562747 TBC1D8BQ0IIM8 1120 aa18.54■□□□□ 0.56
CDT1-202ENST00000562747 COL19A1Q14993 1142 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms