RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 TGS1Q96RS0 853 aaKnown RBP12.49□□□□□ -0.41
LPCAT4-202ENST00000562404 ERVK-5Q9HDB9 667 aa12.49□□□□□ -0.41
LPCAT4-202ENST00000562404 SQORQ9Y6N5 450 aa12.49□□□□□ -0.41
LPCAT4-202ENST00000562404 M0QZ92 97 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 RPLP2P05387 115 aaKnown RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 GCFC2P16383 781 aaKnown RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 GATMP50440 423 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 NFX1Q12986 1120 aaKnown RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 PAK2Q13177 524 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 FAM228AQ86W67 206 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 ZNF689Q96CS4 500 aaPredicted RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 FAM20AQ96MK3 541 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 COL25A1Q9BXS0 654 aaPredicted RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 NIFKQ9BYG3 293 aaKnown RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 ADAMTS10Q9H324 1103 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 RGL1Q9NZL6 768 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 SEPT9Q9UHD8 586 aaPredicted RBP12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 PLXNA4Q9HCM2 1894 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 CUL9Q8IWT3 2517 aa12.48□□□□□ -0.41
LPCAT4-202ENST00000562404 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 ZBTB39O15060 712 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 MAGEB2O15479 319 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 RPS6KA5O75582 802 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 NPEPPSP55786 919 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 NLRP11P59045 1033 aaKnown RBP12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 ST3GAL5Q9UNP4 418 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 AKT3Q9Y243 479 aa12.47□□□□□ -0.41
LPCAT4-202ENST00000562404 ADGRA3Q8IWK6 1321 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 DLL1O00548 723 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 TBX3O15119 743 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 CSDE1O75534 798 aaKnown RBP12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 DGKIO75912 1065 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 IBSPP21815 317 aaPredicted RBP12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 FGFR4P22455 802 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 GPC3P51654 580 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 PSMC5P62195 406 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 TBC1D8BQ0IIM8 1120 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 DSC3Q14574 896 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 DYDC2Q96IM9 177 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 C8orf76Q96K31 380 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 MTMR9Q96QG7 549 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 BRMS1Q9HCU9 246 aa12.46□□□□□ -0.41
LPCAT4-202ENST00000562404 C9IYK1 514 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 SLITRK3O94933 977 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 ATP2B1P20020 1258 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 CYP4A11Q02928 519 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 TFF2Q03403 129 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 CTTNQ14247 550 aaKnown RBP12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 EPHA7Q15375 998 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 TMEM192Q8IY95 271 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 FBXO18Q8NFZ0 1043 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 ADAM2Q99965 735 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 LXNQ9BS40 222 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 FTHL17Q9BXU8 183 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
LPCAT4-202ENST00000562404 A0A087WWV3 80 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 MAFO75444 373 aaPredicted RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 P4HBP07237 508 aaKnown RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 TRIM29Q14134 588 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 NBR1Q14596 966 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 RABEP1Q15276 862 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 CALCRLQ16602 461 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 PAN2Q504Q3 1202 aaKnown RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 FAM102BQ5T8I3 360 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 NPAS4Q8IUM7 802 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 FIBCD1Q8N539 461 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 CLP1Q92989 425 aaKnown RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 MAP7D2Q96T17 732 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 NAP1L4Q99733 375 aaKnown RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 TTC12Q9H892 705 aaPredicted RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 CYP26B1Q9NR63 512 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 RGS18Q9NS28 235 aa12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
LPCAT4-202ENST00000562404 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 A0A087WZ62 844 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 POTEMA6NI47 508 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 H3BNC9 293 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 GPR182O15218 404 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms