RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SMAP1Q8IYB5 467 aaPredicted RBP28.58■■■□□ 2.17
NME3-202ENST00000561637 TMEM40Q8WWA1 233 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 TMX1Q9H3N1 280 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 DISC1Q9NRI5 854 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 PADI3Q9ULW8 664 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 GAS7O60861 476 aa28.57■■■□□ 2.16
NME3-202ENST00000561637 LRCH2Q5VUJ6 765 aa28.57■■■□□ 2.16
NME3-202ENST00000561637 TNPO1Q92973 898 aaKnown RBP28.57■■■□□ 2.16
NME3-202ENST00000561637 PHF20Q9BVI0 1012 aa28.57■■■□□ 2.16
NME3-202ENST00000561637 TCEAL9Q9UHQ7 104 aa28.57■■■□□ 2.16
NME3-202ENST00000561637 COL1A2P08123 1366 aa28.57■■■□□ 2.16
NME3-202ENST00000561637 WDR64B1ANS9 1081 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 C5orf67F2Z3F1 127 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 SLC37A4O43826 429 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 ME3Q16798 604 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 Q4G0T1 1027 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 FIBCD1Q8N539 461 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 IL17RAQ96F46 866 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 RC3H2Q9HBD1 1191 aaKnown RBP28.56■■■□□ 2.16
NME3-202ENST00000561637 STK36Q9NRP7 1315 aa28.56■■■□□ 2.16
NME3-202ENST00000561637 KIAA1671Q9BY89 1806 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 KDM3AQ9Y4C1 1321 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 CYP3A7-CYP3A51PA0A087WV96 503 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 FAM205CA6NFA0 338 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 M0QZ92 97 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 TBX10O75333 385 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 PSMD10O75832 226 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 VTNP04004 478 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 FDPSP14324 419 aaKnown RBP28.55■■■□□ 2.16
NME3-202ENST00000561637 IBSPP21815 317 aaPredicted RBP28.55■■■□□ 2.16
NME3-202ENST00000561637 CYP3A7P24462 503 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 CLCN3P51790 818 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 HERC4Q5GLZ8 1057 aaPredicted RBP28.55■■■□□ 2.16
NME3-202ENST00000561637 EARS2Q5JPH6 523 aaKnown RBP28.55■■■□□ 2.16
NME3-202ENST00000561637 RNF135Q8IUD6 432 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 ETNPPLQ8TBG4 499 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 BBXQ8WY36 941 aaPredicted RBP28.55■■■□□ 2.16
NME3-202ENST00000561637 MBOAT7Q96N66 472 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 RIT2Q99578 217 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 TEKT3Q9BXF9 490 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 NOC2LQ9Y3T9 749 aaKnown RBP28.55■■■□□ 2.16
NME3-202ENST00000561637 USP34Q70CQ2 3546 aa28.55■■■□□ 2.16
NME3-202ENST00000561637 TMEM150BA6NC51 233 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 LINC01565O15544 149 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 NCK2O43639 380 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 MGEA5O60502 916 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 CDKL5O76039 1030 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 CSPG5O95196 566 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 CENPBP07199 599 aaPredicted RBP28.54■■■□□ 2.16
NME3-202ENST00000561637 BMPR1AP36894 532 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 PRKCEQ02156 737 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 PAK2Q13177 524 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 NONOQ15233 471 aaKnown RBP eCLIP28.54■■■□□ 2.16
NME3-202ENST00000561637 MFSD14AQ96MC6 490 aa28.54■■■□□ 2.16
NME3-202ENST00000561637 ORC3Q9UBD5 711 aaPredicted RBP28.54■■■□□ 2.16
NME3-202ENST00000561637 RB1P06400 928 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 GATMP50440 423 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 FOSBP53539 338 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 ST3GAL1Q11201 340 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 KIZQ2M2Z5 673 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 KRT25Q7Z3Z0 450 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 NME8Q8N427 588 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 LRRC71Q8N4P6 559 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 METTL13Q8N6R0 699 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 ZNF668Q96K58 619 aaPredicted RBP28.53■■■□□ 2.16
NME3-202ENST00000561637 IGFLR1Q9H665 355 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 ERVK-5Q9HDB9 667 aa28.53■■■□□ 2.16
NME3-202ENST00000561637 OATP04181 439 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 RPLP2P05387 115 aaKnown RBP28.52■■■□□ 2.16
NME3-202ENST00000561637 LETM2Q2VYF4 491 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 GALNT17Q6IS24 598 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 B3GNT9Q6UX72 402 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 CRIPAKQ8N1N5 446 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 PRSS33Q8NF86 280 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 OSMRQ99650 979 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 C11orf84Q9BUA3 381 aaPredicted RBP28.52■■■□□ 2.16
NME3-202ENST00000561637 C22orf23Q9BZE7 217 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 LMAN2LQ9H0V9 348 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 SQORQ9Y6N5 450 aa28.52■■■□□ 2.16
NME3-202ENST00000561637 ADGRA3Q8IWK6 1321 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 JAK2O60674 1132 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 NEK4P51957 841 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 NFX1Q12986 1120 aaKnown RBP28.51■■■□□ 2.15
NME3-202ENST00000561637 MIER3Q7Z3K6 550 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 LINC01465Q8N7H1 131 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 GTF3C6Q969F1 213 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 POP1Q99575 1024 aaKnown RBP28.51■■■□□ 2.15
NME3-202ENST00000561637 SH2D3AQ9BRG2 576 aa28.51■■■□□ 2.15
NME3-202ENST00000561637 DDX25Q9UHL0 483 aaKnown RBP28.51■■■□□ 2.15
NME3-202ENST00000561637 GPR32O75388 356 aa28.5■■■□□ 2.15
NME3-202ENST00000561637 SMAD4Q13485 552 aaKnown RBP28.5■■■□□ 2.15
NME3-202ENST00000561637 CAMK1Q14012 370 aa28.5■■■□□ 2.15
NME3-202ENST00000561637 ANKRD1Q15327 319 aa28.5■■■□□ 2.15
NME3-202ENST00000561637 IER5LQ5T953 404 aa28.5■■■□□ 2.15
NME3-202ENST00000561637 PIK3AP1Q6ZUJ8 805 aa28.5■■■□□ 2.15
NME3-202ENST00000561637 ZNF689Q96CS4 500 aaPredicted RBP28.5■■■□□ 2.15
NME3-202ENST00000561637 SNX27Q96L92 541 aa28.5■■■□□ 2.15
NME3-202ENST00000561637 CCDC194A0A1B0GVG4 234 aa28.49■■■□□ 2.15
NME3-202ENST00000561637 EML1O00423 815 aa28.49■■■□□ 2.15
NME3-202ENST00000561637 STBD1O95210 358 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms