RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 UFL1O94874 794 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 HMOX1P09601 288 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 SNRPA1P09661 255 aaKnown RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 COL6A1P12109 1028 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 RAC2P15153 192 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 GDNFP39905 211 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 CCNFP41002 786 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 ID4P47928 161 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 CASP7P55210 303 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 FXNQ16595 210 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 SFRP5Q5T4F7 317 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 CDKAL1Q5VV42 579 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 VHLLQ6RSH7 139 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 C6orf15Q6UXA7 325 aaPredicted RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 DBX2Q6ZNG2 339 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 CCDC129Q6ZRS4 1044 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 CCDC144CPQ8IYA2 1237 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 ZNF34Q8IZ26 560 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 TAB3Q8N5C8 712 aaPredicted RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 IL17REQ8NFR9 667 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 IRF2BPLQ9H1B7 796 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 VEZTQ9HBM0 779 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 SMG5Q9UPR3 1016 aaKnown RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 RRP7AQ9Y3A4 280 aaKnown RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 PCDHAC2Q9Y5I4 1007 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 SLC12A7Q9Y666 1083 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 WDFY4Q6ZS81 3184 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 DDX60LQ5H9U9 1706 aaKnown RBP4.12□□□□□ -1.75
SPG11-225ENST00000561391 DUOX1Q9NRD9 1551 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 GRXCR1A8MXD5 290 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 C9IYK1 514 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 CCER2I3L3R5 266 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 MED14OSP0DP75 135 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 CYP2C8P10632 490 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 MYL6BP14649 208 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 GLDCP23378 1020 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 EPHB4P54760 987 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 SLC7A5Q01650 507 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 RBL2Q08999 1139 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 SNAPC2Q13487 334 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 VGLL4Q14135 290 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 RASA3Q14644 834 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 ACAP1Q15027 740 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 DLGAP5Q15398 846 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 NKPD1Q17RQ9 610 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 KIAA1211LQ6NV74 962 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 KIF6Q6ZMV9 814 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 CELF2-AS1Q8N7Q2 184 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 C19orf47Q8N9M1 422 aaKnown RBP4.12□□□□□ -1.75
SPG11-225ENST00000561391 ABHD4Q8TB40 342 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 MICAL1Q8TDZ2 1067 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 KCNN1Q92952 543 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 CCDC120Q96HB5 630 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 C20orf173Q96LM9 149 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 PHAXQ9H814 394 aaKnown RBP4.12□□□□□ -1.75
SPG11-225ENST00000561391 KCNK12Q9HB15 430 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 ZCCHC17Q9NP64 241 aaKnown RBP4.12□□□□□ -1.75
SPG11-225ENST00000561391 PARD6AQ9NPB6 346 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 SUCOQ9UBS9 1254 aaKnown RBP4.12□□□□□ -1.75
SPG11-225ENST00000561391 FBXL21Q9UKT6 434 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 ZNF214Q9UL59 606 aaPredicted RBP4.12□□□□□ -1.75
SPG11-225ENST00000561391 ATP11BQ9Y2G3 1177 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 MAP3K15Q6ZN16 1313 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 ZDBF2Q9HCK1 2354 aa4.12□□□□□ -1.75
SPG11-225ENST00000561391 B2RBV5 119 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 ERC2O15083 957 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 ANP32CO43423 234 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 KLF4O43474 513 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 ALADP13716 330 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 BMP7P18075 431 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 PMS1P54277 932 aaKnown RBP4.11□□□□□ -1.75
SPG11-225ENST00000561391 RTP1P59025 263 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 RAB33AQ14088 237 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 BBS9Q3SYG4 887 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 DACT2Q5SW24 774 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 AXDND1Q5T1B0 1012 aaPredicted RBP4.11□□□□□ -1.75
SPG11-225ENST00000561391 DCAF15Q66K64 600 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 FAM214BQ7L5A3 538 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 ADAT2Q7Z6V5 191 aaKnown RBP4.11□□□□□ -1.75
SPG11-225ENST00000561391 FAM178BQ8IXR5 827 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.11□□□□□ -1.75
SPG11-225ENST00000561391 PRSS33Q8NF86 280 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 RNF141Q8WVD5 230 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 COA7Q96BR5 231 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 ZBED3Q96IU2 234 aaPredicted RBP4.11□□□□□ -1.75
SPG11-225ENST00000561391 ATP13A1Q9HD20 1204 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 KCNH3Q9ULD8 1083 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 MAPK8IP1Q9UQF2 711 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 MYO9BQ13459 2157 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 UBR2Q8IWV8 1755 aa4.11□□□□□ -1.75
SPG11-225ENST00000561391 NUP98P52948 1817 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 F8W031 263 aaPredicted RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 MEIS1O00470 390 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 FOXD2O60548 495 aaPredicted RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 GJB6O95452 261 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 HMGCRP04035 888 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 IL13P35225 146 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 RPS8P62241 208 aaKnown RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 RNF4P78317 190 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 AUHQ13825 339 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms