RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 M0R296 226 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 FSCN2O14926 492 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 PER2O15055 1255 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 GPR32O75388 356 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 LAG3P18627 525 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 ERVFC1P60507 584 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 ZXDAP98168 799 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 KCNC3Q14003 757 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 DSC3Q14574 896 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM228AQ86W67 206 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 SMAP1Q8IYB5 467 aaPredicted RBP13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 COLGALT1Q8NBJ5 622 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 VN1R2Q8NFZ6 395 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 RASGRP4Q8TDF6 673 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 PBXIP1Q96AQ6 731 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 PRRX2Q99811 253 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 CWH43Q9H720 699 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 CEP131Q9UPN4 1083 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 GOLGA8AA7E2F4 631 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 MAGEB2O15479 319 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 HOXA2O43364 376 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 SRGAP2BP0DMP2 458 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 IBSPP21815 317 aaPredicted RBP13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 KCNA4P22459 653 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 CDC27P30260 824 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 SETQ01105 290 aaPredicted RBP13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 KIZQ2M2Z5 673 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 JAKMIP3Q5VZ66 844 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 CKAP2LQ8IYA6 745 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 MRPS27Q92552 414 aaKnown RBP13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 OSMRQ99650 979 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 ZNF577Q9BSK1 485 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 ZMYND12Q9H0C1 365 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 TMEM117Q9H0C3 514 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 EVPLQ92817 2033 aa13.42□□□□□ -0.26
CARMIL3-204ENST00000561354 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 VTNP04004 478 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 PSAPP07602 524 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 FGFR1P11362 822 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 RBM10P98175 930 aaKnown RBP13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 SIGLEC14Q08ET2 396 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 KRT32Q14532 448 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 ADCK5Q3MIX3 580 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 BMP2KLQ5H9B9 411 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 SUGP1Q8IWZ8 645 aaKnown RBP13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 METTL13Q8N6R0 699 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 CCDC12Q8WUD4 166 aaPredicted RBP13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 RPGRIP1Q96KN7 1286 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 NGRNQ9NPE2 291 aaKnown RBP13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 HCSTQ9UBK5 93 aa13.41□□□□□ -0.26
CARMIL3-204ENST00000561354 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 EIF4BP23588 611 aaKnown RBP13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 CIITAP33076 1130 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 PTPN5P54829 565 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 IRX6P78412 446 aaPredicted RBP13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 ANKRD54Q6NXT1 300 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 KCNT2Q6UVM3 1135 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 LRRC55Q6ZSA7 311 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 REXO1Q8N1G1 1221 aaKnown RBP13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 FBXL6Q8N531 539 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 LINC01465Q8N7H1 131 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 CASD1Q96PB1 797 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 TCF25Q9BQ70 676 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 TCEAL9Q9UHQ7 104 aa13.4□□□□□ -0.26
CARMIL3-204ENST00000561354 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.27
CARMIL3-204ENST00000561354 TMOD1P28289 359 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 GNA11P29992 359 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 PPM1AP35813 382 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 NLRP11P59045 1033 aaKnown RBP13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 KRT17Q04695 432 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 IER5LQ5T953 404 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 EFCAB12Q6NXP0 572 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 SYCE2Q6PIF2 218 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 ABI1Q8IZP0 508 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 ZNF558Q96NG5 402 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
CARMIL3-204ENST00000561354 RNF19AQ9NV58 838 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms