RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RPUSD2Q8IZ73 545 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 SNX29Q8TEQ0 813 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 FOXD4L4Q8WXT5 416 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CEP170P1Q96L14 293 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CSRNP2Q9H175 543 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 RSPH10B2B2RC85 870 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 CUTAO60888 179 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 DGAT1O75907 488 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 EYA4O95677 639 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 RSPH10BP0C881 870 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 CSF2RAP15509 400 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 UBA7P41226 1012 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 CCL23P55773 120 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 KRT85P78386 507 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 MRPS6P82932 125 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 MBTPS1Q14703 1052 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 TMEM119Q4V9L6 283 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 PLA2G4FQ68DD2 849 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 C16orf59Q7L2K0 433 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 CABP7Q86V35 215 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 USP38Q8NB14 1042 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 PIGOQ8TEQ8 1089 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 SLC7A3Q8WY07 619 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 ZBTB10Q96DT7 871 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 PNMA5Q96PV4 448 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 IL23AQ9NPF7 189 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 DDX19AQ9NUU7 478 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 KIAA1024Q9UPX6 916 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 DNM3Q9UQ16 869 aa10.74□□□□□ -0.69
RABGGTA-221ENST00000561055 A0A1W2PPC1 479 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 ASAP2O43150 1006 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 NBNO60934 754 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 GPR32O75388 356 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 DNM2P50570 870 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 POU5F1BQ06416 359 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 PLEKHG4Q58EX7 1191 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 AXDND1Q5T1B0 1012 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 METTL13Q8N6R0 699 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 TCP11Q8WWU5 503 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 CALML4Q96GE6 196 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 SCLYQ96I15 445 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 EPSTI1Q96J88 318 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 CLIC6Q96NY7 704 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 CELF4Q9BZC1 486 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 SCAND2PQ9GZW5 306 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 XPNPEP1Q9NQW7 623 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 CDY2AQ9Y6F7 541 aa10.73□□□□□ -0.69
RABGGTA-221ENST00000561055 A0A087WWV3 80 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 M0QZ92 97 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 CYP11B2P19099 503 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 ARL2P36404 184 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 GPC3P51654 580 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 CLCN3P51790 818 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 CRYBB1P53674 252 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 POLGP54098 1239 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 EPHB4P54760 987 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 DRP2Q13474 957 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 EMC2Q15006 297 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 FBXO47Q5MNV8 452 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 TMEM240Q5SV17 173 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 RASIP1Q5U651 963 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 PSRC1Q6PGN9 363 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 PADI6Q6TGC4 694 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 USP49Q70CQ1 688 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 KCNK18Q7Z418 384 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 LRRC71Q8N4P6 559 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 SYT2Q8N9I0 419 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 MCPH1Q8NEM0 835 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 LEO1Q8WVC0 666 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 MAP7D2Q96T17 732 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 MTRQ99707 1265 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 ADAMTS10Q9H324 1103 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 SUGCTQ9HAC7 445 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 KCND2Q9NZV8 630 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 CHMP5Q9NZZ3 219 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 PCDHA7Q9UN72 937 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 TRPV2Q9Y5S1 764 aa10.72□□□□□ -0.69
RABGGTA-221ENST00000561055 E9PMD0 336 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 FGBP02675 491 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 TXLNAP40222 546 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 RANBP2P49792 3224 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 SLC12A3P55017 1021 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 NLRP11P59045 1033 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 MXD4Q14582 209 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 TRIP11Q15643 1979 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 FOXD4L6Q3SYB3 417 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 FNDC1Q4ZHG4 1894 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 ADALQ6DHV7 355 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 CNKSR3Q6P9H4 555 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 SHC4Q6S5L8 630 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms