RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 XKR3Q5GH77 459 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 PPP2R2DQ66LE6 453 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 TAF2Q6P1X5 1199 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 OTOP2Q7RTS6 562 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 RTN4RL1Q86UN2 441 aaPredicted RBP13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 CATSPER3Q86XQ3 398 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 RETREG2Q8NC44 543 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 COG5Q9UP83 839 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 ZDHHC9Q9Y397 364 aa13.66□□□□□ -0.22
ALDH1A3-206ENST00000560555 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 MYH15Q9Y2K3 1946 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 H3BQV1 296 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 GPR32O75388 356 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 CTSHP09668 335 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 POU3F3P20264 500 aaPredicted RBP13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 CDC25AP30304 524 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 RFC2P35250 354 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 RABGGTBP53611 331 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 ATP2C1P98194 919 aaPredicted RBP13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 CYP4A11Q02928 519 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 TMEM62Q0P6H9 643 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 LPIN1Q14693 890 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 PLEKHG4Q58EX7 1191 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 RILPL1Q5EBL4 403 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 IGSF22Q8N9C0 903 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 TMEM40Q8WWA1 233 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 LXNQ9BS40 222 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 ADAMTS10Q9H324 1103 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 NRBP2Q9NSY0 501 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 KIF3AQ9Y496 699 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 MTCH2Q9Y6C9 303 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
ALDH1A3-206ENST00000560555 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 PRR33A8MZF0 331 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 RFXAPO00287 272 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 CAND2O75155 1236 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 MYOGP15173 224 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 CKAP2LQ8IYA6 745 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 LRRC71Q8N4P6 559 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 TMX1Q9H3N1 280 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 XPNPEP1Q9NQW7 623 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 CHD9Q3L8U1 2897 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
ALDH1A3-206ENST00000560555 TTC3P53804 2025 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 STX6O43752 255 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 GTPBP6O43824 516 aaPredicted RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 PRPHP41219 470 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 CLCN3P51790 818 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 MRPS6P82932 125 aaKnown RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 PDIA5Q14554 519 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 MTERF2Q49AM1 385 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 CRIPAKQ8N1N5 446 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 NME8Q8N427 588 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 LINC01599Q8WXQ3 324 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 FAM167AQ96KS9 214 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 POLR3CQ9BUI4 534 aaPredicted RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 ZSWIM4Q9H7M6 989 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 CYP26B1Q9NR63 512 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 PCDHA11Q9Y5I1 949 aa13.63□□□□□ -0.23
ALDH1A3-206ENST00000560555 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 MAGEB2O15479 319 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 ARHGEF15O94989 841 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 VTNP04004 478 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 PDCP20941 246 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 RPA1P27694 616 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 YWHABP31946 246 aaKnown RBP13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 RARRES1P49788 294 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 DEFB103AP81534 67 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 NHLH1Q02575 133 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 HSCBQ8IWL3 235 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 CCDC155Q8N6L0 562 aa13.62□□□□□ -0.23
ALDH1A3-206ENST00000560555 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms