RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
SPG11-217ENST00000559511 MUM1L1Q5H9M0 696 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 TCERG1LQ5VWI1 586 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 NFRKBQ6P4R8 1299 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 RPGRIP1Q96KN7 1286 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 RIT2Q99578 217 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 METTL14Q9HCE5 456 aaKnown RBP12.11□□□□□ -0.47
SPG11-217ENST00000559511 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 AJAP1Q9UKB5 411 aaPredicted RBP12.11□□□□□ -0.47
SPG11-217ENST00000559511 L1RE1Q9UN81 338 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 DHX15O43143 795 aaKnown RBP12.11□□□□□ -0.47
SPG11-217ENST00000559511 ERLIN1O75477 346 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 ALAS1P13196 640 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 CXCR5P32302 372 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 BACE1P56817 501 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 IRF2BP2Q7Z5L9 587 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
SPG11-217ENST00000559511 OSBPL9Q96SU4 736 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 PSMB7Q99436 277 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPG11-217ENST00000559511 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
SPG11-217ENST00000559511 BCRP11274 1271 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 PRLRP16471 622 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 OAS2P29728 719 aaKnown RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 MRPS9P82933 396 aaKnown RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 PTK2Q05397 1052 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 MAPK7Q13164 816 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 ITGB3BPQ13352 177 aaPredicted RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 NFIL3Q16649 462 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 ODR4Q5SWX8 454 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 HDXQ7Z353 690 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 DAW1Q8N136 415 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 RNF10Q8N5U6 811 aaKnown RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 AS3MTQ9HBK9 375 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 SPON1Q9HCB6 807 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 GCNT4Q9P109 453 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 SEL1LQ9UBV2 794 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 ODF2LQ9ULJ1 636 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 POLR3GO15318 223 aaPredicted RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 HIP1RO75146 1068 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 TUBBP07437 444 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 GUCY2CP25092 1073 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 KLRC1P26715 233 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 NAB2Q15742 525 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 GJB7Q6PEY0 223 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 GBP6Q6ZN66 633 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 MCF2L2Q86YR7 1114 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 FAM186BQ8IYM0 893 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 SYTL5Q8TDW5 730 aaPredicted RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 WNK4Q96J92 1243 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 FHDC1Q9C0D6 1143 aaPredicted RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 ZCCHC17Q9NP64 241 aaKnown RBP12.1□□□□□ -0.47
SPG11-217ENST00000559511 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 HYOU1Q9Y4L1 999 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 ZHX2Q9Y6X8 837 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 UBE4BO95155 1302 aa12.1□□□□□ -0.47
SPG11-217ENST00000559511 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 ARHGEF35A5YM69 484 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 H3BQF6 201 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 VWA5AO00534 786 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 PPP1R37O75864 691 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
SPG11-217ENST00000559511 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
SPG11-217ENST00000559511 JAM2P57087 298 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 ZNF572Q7Z3I7 529 aaPredicted RBP12.09□□□□□ -0.47
SPG11-217ENST00000559511 ZBTB9Q96C00 473 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 ATG4CQ96DT6 458 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 STRA6Q9BX79 667 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 AGPAT3Q9NRZ7 376 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 UBIAD1Q9Y5Z9 338 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 LOC285556D6RIA3 1793 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 LCTP09848 1927 aa12.09□□□□□ -0.47
SPG11-217ENST00000559511 TARSL2A2RTX5 802 aaKnown RBP12.08□□□□□ -0.47
SPG11-217ENST00000559511 GTPBP10A4D1E9 387 aaKnown RBP12.08□□□□□ -0.47
SPG11-217ENST00000559511 ZBED4O75132 1171 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 PALMO75781 387 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 ZMYND10O75800 440 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms