RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 SQORQ9Y6N5 450 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 MYH11P35749 1972 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 GAS2O43903 313 aaKnown RBP13.42□□□□□ -0.26
CDK12-203ENST00000558240 YEATS4O95619 227 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 FGBP02675 491 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 ACRP10323 421 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 MARCKSP29966 332 aaPredicted RBP13.42□□□□□ -0.26
CDK12-203ENST00000558240 CDC25AP30304 524 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 RARRES1P49788 294 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 DNM2P50570 870 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 CLCN3P51790 818 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 CDC42EP1Q00587 391 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 STK38Q15208 465 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 ECM1Q16610 540 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 HYIQ5T013 277 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 ZNF365Q70YC5 407 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 DEFB128Q7Z7B8 93 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
CDK12-203ENST00000558240 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 PIGOQ8TEQ8 1089 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 MAP7D2Q96T17 732 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDK12-203ENST00000558240 CELF4Q9BZC1 486 aaKnown RBP13.42□□□□□ -0.26
CDK12-203ENST00000558240 CFAP45Q9UL16 551 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 KIAA1024Q9UPX6 916 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 TRPV2Q9Y5S1 764 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
CDK12-203ENST00000558240 PPP6R2O75170 966 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 DGAT1O75907 488 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 ACTN1P12814 892 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 DDIT3P35638 169 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 UBA7P41226 1012 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 POLGP54098 1239 aaPredicted RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 NUCB2P80303 420 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 TMEM62Q0P6H9 643 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 SHHQ15465 462 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 PLEKHG4Q58EX7 1191 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 C9orf50Q5SZB4 431 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 LRRC71Q8N4P6 559 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 CCDC43Q96MW1 224 aaKnown RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 NT5C3AQ9H0P0 336 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 FBXO2Q9UK22 296 aaPredicted RBP13.41□□□□□ -0.26
CDK12-203ENST00000558240 DNM3Q9UQ16 869 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
CDK12-203ENST00000558240 SPTLC2O15270 562 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 GPR32O75388 356 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 BAIAP3O94812 1187 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 VTNP04004 478 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
CDK12-203ENST00000558240 GRIN1Q05586 938 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 DRP2Q13474 957 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 LPIN1Q14693 890 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 EMC2Q15006 297 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 CNKSR3Q6P9H4 555 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 CABP7Q86V35 215 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
CDK12-203ENST00000558240 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 SEPT8Q92599 483 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 APBB2Q92870 758 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 CDK5RAP3Q96JB5 506 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 MTRQ99707 1265 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 CCSER1Q9C0I3 900 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
CDK12-203ENST00000558240 ATP6V0A4Q9HBG4 840 aa13.4□□□□□ -0.26
CDK12-203ENST00000558240 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
CDK12-203ENST00000558240 A0A087WWV3 80 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 ABHD14A-ACY1A0A1B0GW23 586 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 ARHGEF35A5YM69 484 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 ASAP2O43150 1006 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 EFCAB14O75071 495 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 EYA4O95677 639 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 GPC3P51654 580 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 NLRP11P59045 1033 aaKnown RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 GRB10Q13322 594 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 FOXD4L6Q3SYB3 417 aaPredicted RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 FOXD4L3Q6VB84 417 aaPredicted RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 TSHZ1Q6ZSZ6 1077 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 PSPC1Q8WXF1 523 aaKnown RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 CALML4Q96GE6 196 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 PNMA5Q96PV4 448 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
CDK12-203ENST00000558240 CSRNP2Q9H175 543 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms