RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 RNF43Q68DV7 783 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 INTS5Q6P9B9 1019 aaKnown RBP3.93□□□□□ -1.78
TRAV28-201ENST00000557548 ESPNLQ6ZVH7 1005 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.93□□□□□ -1.78
TRAV28-201ENST00000557548 DENND1CQ8IV53 801 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 IFNL2Q8IZJ0 200 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 THEMISQ8N1K5 641 aaPredicted RBP3.93□□□□□ -1.78
TRAV28-201ENST00000557548 MYRIPQ8NFW9 859 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 NETO1Q8TDF5 533 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 FERMT2Q96AC1 680 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 MVB12AQ96EY5 273 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 DBNDD2Q9BQY9 259 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 G6PC3Q9BUM1 346 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 METTL22Q9BUU2 404 aaPredicted RBP3.93□□□□□ -1.78
TRAV28-201ENST00000557548 SMOC1Q9H4F8 434 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 PRDM12Q9H4Q4 367 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 IMPACTQ9P2X3 320 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 EBF1Q9UH73 591 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 PNMA2Q9UL42 364 aa3.93□□□□□ -1.78
TRAV28-201ENST00000557548 TMEM265A0A087WTH1 108 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 A0A1W2PQ27 194 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 A0A1W2PQ45 241 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 A0A1W2PQ64 194 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 A0A1W2PQC6 194 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 A0A1W2PQD8 194 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 A0A1W2PQY0 241 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 UBA6A0AVT1 1052 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 FAM227AF5H4B4 570 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 ELL2O00472 640 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 NPHP1O15259 732 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 WDHD1O75717 1129 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 TUSC2O75896 110 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 FGAP02671 866 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MSL3P1P0C860 447 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MTHFD2P13995 350 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 PDCP20941 246 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 ECE1P42892 770 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 SLC5A3P53794 718 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 EPHA5P54756 1037 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 CORO7P57737 925 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 RTP1P59025 263 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 CCT2P78371 535 aaKnown RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 ALDH6A1Q02252 535 aaKnown RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 GRIN1Q05586 938 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 NFIAQ12857 509 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 CHAF1AQ13111 956 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 PKN1Q16512 942 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 KIAA0753Q2KHM9 967 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MUM1Q2TAK8 710 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 HSF5Q4G112 596 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 EMC4Q5J8M3 183 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MBNL2Q5VZF2 373 aaKnown RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 USP45Q70EL2 814 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 NME9Q86XW9 330 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 PHYKPLQ8IUZ5 450 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 FAM186BQ8IYM0 893 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 ANKRD42Q8N9B4 389 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 SHKBP1Q8TBC3 707 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 PNISRQ8TF01 805 aaKnown RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 AUTS2Q8WXX7 1259 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 COA7Q96BR5 231 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 SYTL4Q96C24 671 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MYD88Q99836 296 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MYL10Q9BUA6 226 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 APOL5Q9BWW9 433 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 B3GNT5Q9BYG0 378 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MAF1Q9H063 256 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 KCTD10Q9H3F6 313 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 FNIP2Q9P278 1114 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 MYOTQ9UBF9 498 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 DPP7Q9UHL4 492 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 NUB1Q9Y5A7 615 aa3.92□□□□□ -1.78
TRAV28-201ENST00000557548 ABHD14A-ACY1A0A1B0GW23 586 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 H3BML4 177 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 HGSO14964 777 aaPredicted RBP3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TBX3O15119 743 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 CYP26A1O43174 497 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 B3GALT2O43825 422 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 MAFKO60675 156 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 NBNO60934 754 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 DTNBO60941 627 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 UBXN7O94888 489 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 HRGP04196 525 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 SETSIPP0DME0 302 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 ALDH5A1P51649 535 aaPredicted RBP3.91□□□□□ -1.78
TRAV28-201ENST00000557548 SLC16A1P53985 500 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 LGALS4P56470 323 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 FAM193AP78312 1265 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 CDK17Q00537 523 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 MVKQ03426 396 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 DUSP4Q13115 394 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 MYBPC3Q14896 1274 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 KIR3DS1Q14943 382 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 CHRNA2Q15822 529 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TMEM95Q3KNT9 176 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 CYP4F22Q6NT55 531 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 CEP128Q6ZU80 1094 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 RTN4RL1Q86UN2 441 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms