RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 UTRNP46939 3433 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 TNFRSF8P28908 595 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 CIITAP33076 1130 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 JAM2P57087 298 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 PAK2Q13177 524 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 TBC1D10BQ4KMP7 808 aaPredicted RBP19.34■□□□□ 0.69
XRCC3-218ENST00000557439 NAA35Q5VZE5 725 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 FAM186BQ8IYM0 893 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 IQCKQ8N0W5 287 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 HSD17B14Q9BPX1 270 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 RASSF4Q9H2L5 321 aa19.34■□□□□ 0.69
XRCC3-218ENST00000557439 IGSF9BQ9UPX0 1349 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 TISP43B9A030 160 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 GOLGA8KD6RF30 607 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 OPA1O60313 960 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 EVI5O60447 810 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 FOSP01100 380 aaPredicted RBP19.33■□□□□ 0.69
XRCC3-218ENST00000557439 PDE6BP35913 854 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 KRT27Q7Z3Y8 459 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 ADAT2Q7Z6V5 191 aaKnown RBP19.33■□□□□ 0.69
XRCC3-218ENST00000557439 BCAS4Q8TDM0 211 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 RNF14Q9UBS8 474 aa19.33■□□□□ 0.69
XRCC3-218ENST00000557439 SCAF8Q9UPN6 1271 aaKnown RBP19.33■□□□□ 0.69
XRCC3-218ENST00000557439 ARP10275 920 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 MMP14P50281 582 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 C1orf186Q6ZWK4 172 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 PALB2Q86YC2 1186 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 OLIG1Q8TAK6 271 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 BORCS6Q96GS4 357 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 CENPHQ9H3R5 247 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 FBXO28Q9NVF7 368 aa19.33■□□□□ 0.68
XRCC3-218ENST00000557439 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.68
XRCC3-218ENST00000557439 VGLL3A8MV65 326 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 COPB2P35606 906 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 FLT3P36888 993 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 GALCP54803 685 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 ARHGAP44Q17R89 818 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 BMT2Q1RMZ1 405 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 ALS2CLQ60I27 953 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 PEX26Q7Z412 305 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 DAAM2Q86T65 1068 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 RUBCNQ92622 972 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 POLR3CQ9BUI4 534 aaPredicted RBP19.32■□□□□ 0.68
XRCC3-218ENST00000557439 CELF4Q9BZC1 486 aaKnown RBP19.32■□□□□ 0.68
XRCC3-218ENST00000557439 TMEM59LQ9UK28 342 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 NR2E1Q9Y466 385 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 ZEB2O60315 1214 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 H2AFZP0C0S5 128 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 ZBTB48P10074 688 aaPredicted RBP19.32■□□□□ 0.68
XRCC3-218ENST00000557439 RPL13P26373 211 aaKnown RBP19.32■□□□□ 0.68
XRCC3-218ENST00000557439 GUCY1A3Q02108 690 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 H2AFVQ71UI9 128 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 TAS2R14Q9NYV8 317 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 AMACRQ9UHK6 382 aa19.32■□□□□ 0.68
XRCC3-218ENST00000557439 SLX4Q8IY92 1834 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 PSMD10O75832 226 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 FLOT1O75955 427 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 ECHS1P30084 290 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 STAT2P52630 851 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 TNNC1P63316 161 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 MAATS1Q7Z4T9 603 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 SEPT11Q9NVA2 429 aaKnown RBP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 SART1O43290 800 aaKnown RBP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 PRKCIP41743 596 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 DRAP1Q14919 205 aaPredicted RBP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 GLIS2Q9BZE0 524 aaPredicted RBP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 CHORDC1Q9UHD1 332 aaPredicted RBP19.31■□□□□ 0.68
XRCC3-218ENST00000557439 DNAJC12Q9UKB3 198 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 PLAAQ9Y263 795 aa19.31■□□□□ 0.68
XRCC3-218ENST00000557439 EIF3HO15372 352 aaKnown RBP eCLIP19.3■□□□□ 0.686e-6■■■■□ 25.8
XRCC3-218ENST00000557439 SCFD2Q8WU76 684 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 METTL14Q9HCE5 456 aaKnown RBP19.3■□□□□ 0.68
XRCC3-218ENST00000557439 NENFQ9UMX5 172 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 GAS7O60861 476 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 FMO5P49326 533 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 ODR4Q5SWX8 454 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 ZSWIM2Q8NEG5 633 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 TRIM31Q9BZY9 425 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 UNC45AQ9H3U1 944 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 PCIF1Q9H4Z3 704 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 PARVGQ9HBI0 331 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 OLFML3Q9NRN5 406 aa19.3■□□□□ 0.68
XRCC3-218ENST00000557439 BZW2Q9Y6E2 419 aaKnown RBP19.3■□□□□ 0.68
XRCC3-218ENST00000557439 YDJCA8MPS7 323 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 F8VZ95 297 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 KRIT1O00522 736 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 SLC16A3O15427 465 aaKnown RBP19.29■□□□□ 0.68
XRCC3-218ENST00000557439 PSMC2P35998 433 aaKnown RBP19.29■□□□□ 0.68
XRCC3-218ENST00000557439 CEP85LQ5SZL2 805 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 BTNL9Q6UXG8 535 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 FAM178BQ8IXR5 827 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 ARHGEF26Q96DR7 871 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 LRRC4CQ9HCJ2 640 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 SERPINA10Q9UK55 444 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 PPP1R9AQ9ULJ8 1098 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms