RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
VRTN-202ENST00000557177 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
VRTN-202ENST00000557177 CIITAP33076 1130 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 DSC3Q14574 896 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 RNF135Q8IUD6 432 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 FBXL16Q8N461 479 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 LINC01465Q8N7H1 131 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 CCDC12Q8WUD4 166 aaPredicted RBP16.35■□□□□ 0.21
VRTN-202ENST00000557177 LENG9Q96B70 501 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 PPP1R16BQ96T49 567 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 ELAC1Q9H777 363 aaKnown RBP16.35■□□□□ 0.21
VRTN-202ENST00000557177 TMEM161AQ9NX61 479 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 HCSTQ9UBK5 93 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 NAP1L2Q9ULW6 460 aaPredicted RBP16.35■□□□□ 0.21
VRTN-202ENST00000557177 PCDHA10Q9Y5I2 948 aa16.35■□□□□ 0.21
VRTN-202ENST00000557177 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 VTNP04004 478 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 PSAPP07602 524 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 GNA11P29992 359 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 FGD1P98174 961 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 Q6ZUG5 572 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 HFE2Q6ZVN8 426 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 RBM23Q86U06 439 aaKnown RBP16.34■□□□□ 0.21
VRTN-202ENST00000557177 METTL13Q8N6R0 699 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 COLGALT1Q8NBJ5 622 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 BRF1Q92994 677 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 KCNH6Q9H252 994 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 CWH43Q9H720 699 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 TLR9Q9NR96 1032 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 AAASQ9NRG9 546 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
VRTN-202ENST00000557177 GABBR1Q9UBS5 961 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 BARX2Q9UMQ3 279 aaPredicted RBP16.34■□□□□ 0.21
VRTN-202ENST00000557177 CEP131Q9UPN4 1083 aa16.34■□□□□ 0.21
VRTN-202ENST00000557177 TECTAO75443 2155 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 LOC730098B7Z3J9 87 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 FSCN2O14926 492 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 EDIL3O43854 480 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 FGF18O76093 207 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 FGFR1P11362 822 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 CLCN3P51790 818 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 NTRK3Q16288 839 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 PRR16Q569H4 304 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 SPOUT1Q5T280 376 aaKnown RBP16.33■□□□□ 0.2
VRTN-202ENST00000557177 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 PHKBQ93100 1093 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 FAM167AQ96KS9 214 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 TLE6Q9H808 572 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 ATP6V0A4Q9HBG4 840 aa16.33■□□□□ 0.2
VRTN-202ENST00000557177 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 WDR64B1ANS9 1081 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 MAGEB2O15479 319 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 ZNF862O60290 1169 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 HSPA4P34932 840 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 ERVFC1P60507 584 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 CBX2Q14781 532 aaPredicted RBP16.32■□□□□ 0.2
VRTN-202ENST00000557177 DUSP6Q16828 381 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
VRTN-202ENST00000557177 THNSL1Q8IYQ7 743 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 BICD2Q8TD16 824 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 RASGRP4Q8TDF6 673 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 EDAQ92838 391 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 JAKMIP1Q96N16 626 aaKnown RBP16.32■□□□□ 0.2
VRTN-202ENST00000557177 CDCA3Q99618 268 aaPredicted RBP16.32■□□□□ 0.2
VRTN-202ENST00000557177 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
VRTN-202ENST00000557177 ADAMTS10Q9H324 1103 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 RNF19AQ9NV58 838 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 TCEAL9Q9UHQ7 104 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 LZTS1Q9Y250 596 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 USP15Q9Y4E8 981 aaPredicted RBP16.32■□□□□ 0.2
VRTN-202ENST00000557177 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
VRTN-202ENST00000557177 PER2O15055 1255 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 OATP04181 439 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 LAG3P18627 525 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 NLRP11P59045 1033 aaKnown RBP16.31■□□□□ 0.2
VRTN-202ENST00000557177 RBM10P98175 930 aaKnown RBP16.31■□□□□ 0.2
VRTN-202ENST00000557177 PLCB3Q01970 1234 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 KCNC3Q14003 757 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
VRTN-202ENST00000557177 EFCAB12Q6NXP0 572 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 LRRC55Q6ZSA7 311 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 ZNF710Q8N1W2 664 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 CCDC148Q8NFR7 591 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 MICAL1Q8TDZ2 1067 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 SUSD6Q92537 303 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 AKT3Q9Y243 479 aa16.31■□□□□ 0.2
VRTN-202ENST00000557177 MSH4O15457 936 aa16.3■□□□□ 0.2
VRTN-202ENST00000557177 IFNAR1P17181 557 aa16.3■□□□□ 0.2
VRTN-202ENST00000557177 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
VRTN-202ENST00000557177 EIF4BP23588 611 aaKnown RBP16.3■□□□□ 0.2
VRTN-202ENST00000557177 TMOD1P28289 359 aa16.3■□□□□ 0.2
VRTN-202ENST00000557177 EVCP57679 992 aa16.3■□□□□ 0.2
VRTN-202ENST00000557177 TMEM184AQ6ZMB5 413 aa16.3■□□□□ 0.2
VRTN-202ENST00000557177 LRRC71Q8N4P6 559 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms