RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 Q6ZSN1 163 aa6.76□□□□□ -1.33
LINC00648-203ENST00000556923 CHST14Q8NCH0 376 aa6.76□□□□□ -1.33
LINC00648-203ENST00000556923 SLC16A11Q8NCK7 471 aa6.76□□□□□ -1.33
LINC00648-203ENST00000556923 OR14K1Q8NGZ2 314 aa6.76□□□□□ -1.33
LINC00648-203ENST00000556923 FOXB1Q99853 325 aa6.76□□□□□ -1.33
LINC00648-203ENST00000556923 VPS11Q9H270 941 aa6.76□□□□□ -1.33
LINC00648-203ENST00000556923 TRAF5O00463 557 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
LINC00648-203ENST00000556923 OPA1O60313 960 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 AMHP03971 560 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 FNTBP49356 437 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 KIF11P52732 1056 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 HGFACQ04756 655 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 POLNQ7Z5Q5 900 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 EDAQ92838 391 aa6.75□□□□□ -1.33
LINC00648-203ENST00000556923 PRLP01236 227 aa6.74□□□□□ -1.33
LINC00648-203ENST00000556923 SDSP20132 328 aa6.74□□□□□ -1.33
LINC00648-203ENST00000556923 ACO1P21399 889 aaKnown RBP6.74□□□□□ -1.33
LINC00648-203ENST00000556923 CCDC144BQ3MJ40 725 aa6.74□□□□□ -1.33
LINC00648-203ENST00000556923 SCAND2PQ9GZW5 306 aaPredicted RBP6.74□□□□□ -1.33
LINC00648-203ENST00000556923 TMEM260Q9NX78 707 aa6.74□□□□□ -1.33
LINC00648-203ENST00000556923 FAM184BQ9ULE4 1060 aa6.74□□□□□ -1.33
LINC00648-203ENST00000556923 PTPDC1A2A3K4 754 aa6.73□□□□□ -1.33
LINC00648-203ENST00000556923 RPS19P39019 145 aaKnown RBP6.73□□□□□ -1.33
LINC00648-203ENST00000556923 RGS3P49796 1198 aa6.73□□□□□ -1.33
LINC00648-203ENST00000556923 SLC6A3Q01959 620 aa6.73□□□□□ -1.33
LINC00648-203ENST00000556923 PIK3R6Q5UE93 754 aa6.73□□□□□ -1.33
LINC00648-203ENST00000556923 GPR135Q8IZ08 494 aa6.73□□□□□ -1.33
LINC00648-203ENST00000556923 MSL2Q9HCI7 577 aa6.73□□□□□ -1.33
LINC00648-203ENST00000556923 ASMTLO95671 621 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 MAP3K12Q12852 859 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 FOXL1Q12952 345 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 ADAM15Q13444 863 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 MAMDC4Q6UXC1 1216 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 UBXN4Q92575 508 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 PCIF1Q9H4Z3 704 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 ACSS2Q9NR19 701 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 SRRDQ9UH36 339 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 MAGEL2Q9UJ55 1249 aa6.72□□□□□ -1.33
LINC00648-203ENST00000556923 H7C1D1 291 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 CBX4O00257 560 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 SLC26A4O43511 780 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 JMJD7P0C870 316 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 PTX3P26022 381 aaPredicted RBP6.71□□□□□ -1.34
LINC00648-203ENST00000556923 MSX2P35548 267 aaPredicted RBP6.71□□□□□ -1.34
LINC00648-203ENST00000556923 ROM1Q03395 351 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 PABPC4Q13310 644 aaKnown RBP eCLIP6.71□□□□□ -1.34
LINC00648-203ENST00000556923 RNF207Q6ZRF8 634 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 ZNF808Q8N4W9 903 aaPredicted RBP6.71□□□□□ -1.34
LINC00648-203ENST00000556923 KIAA1958Q8N8K9 716 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 E2F7Q96AV8 911 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 MAML3Q96JK9 1138 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 DRC1Q96MC2 740 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 PIF1Q9H611 641 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 AGO3Q9H9G7 860 aaKnown RBP6.71□□□□□ -1.34
LINC00648-203ENST00000556923 PLA2G3Q9NZ20 509 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 B4GALT6Q9UBX8 382 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 VWA7Q9Y334 891 aa6.71□□□□□ -1.34
LINC00648-203ENST00000556923 CTDP1Q9Y5B0 961 aaPredicted RBP6.71□□□□□ -1.34
LINC00648-203ENST00000556923 UBA6A0AVT1 1052 aaPredicted RBP6.7□□□□□ -1.34
LINC00648-203ENST00000556923 RFPL3O75679 317 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 ACVRL1P37023 503 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 GDF5P43026 501 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 ANTXR2P58335 489 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 USP39Q53GS9 565 aaKnown RBP6.7□□□□□ -1.34
LINC00648-203ENST00000556923 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 CDCA2Q69YH5 1023 aaPredicted RBP6.7□□□□□ -1.34
LINC00648-203ENST00000556923 SLFN12LQ6IEE8 588 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 KLHDC10Q6PID8 442 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 EXTL1Q92935 676 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 NELFAQ9H3P2 528 aa6.7□□□□□ -1.34
LINC00648-203ENST00000556923 PMS2P1A4D2B8 440 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 PLSCR1O15162 318 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 FZD7O75084 574 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 CYP17A1P05093 508 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 FLT3P36888 993 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 STAT3P40763 770 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 RANGAP1P46060 587 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-203ENST00000556923 FOXE3Q13461 319 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 SAFB2Q14151 953 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC00648-203ENST00000556923 GRM7Q14831 915 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 ACAP1Q15027 740 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 ZNF174Q15697 407 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 NRN1LQ496H8 165 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 TTC38Q5R3I4 469 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-203ENST00000556923 FAM89AQ96GI7 184 aa6.69□□□□□ -1.34
LINC00648-203ENST00000556923 SAE1Q9UBE0 346 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-203ENST00000556923 SLPIP03973 132 aa6.68□□□□□ -1.34
LINC00648-203ENST00000556923 SLC9A1P19634 815 aa6.68□□□□□ -1.34
LINC00648-203ENST00000556923 ATP2C1P98194 919 aaPredicted RBP6.68□□□□□ -1.34
LINC00648-203ENST00000556923 RIN1Q13671 783 aa6.68□□□□□ -1.34
LINC00648-203ENST00000556923 MYBPC3Q14896 1274 aa6.68□□□□□ -1.34
LINC00648-203ENST00000556923 EPHA7Q15375 998 aa6.68□□□□□ -1.34
LINC00648-203ENST00000556923 CFAP100Q494V2 611 aa6.68□□□□□ -1.34
LINC00648-203ENST00000556923 MIIPQ5JXC2 388 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms