RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 LRRC14Q15048 493 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ZC3H12AQ5D1E8 599 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 CNNM3Q8NE01 707 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF397Q8NF99 534 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ESR2Q92731 530 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 FERMT2Q96AC1 680 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 TCEANC2Q96MN5 208 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF830Q96NB3 372 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 UBAC1Q9BSL1 405 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 CNOT7Q9UIV1 285 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 RIPOR2Q9Y4F9 1068 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF804BA4D1E1 1349 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 MYH3P11055 1940 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 SH2B2O14492 632 aaPredicted RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 IFIT3O14879 490 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 ARHGAP6O43182 974 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 STX10O60499 249 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 CTDNEP1O95476 244 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 TOP1P11387 765 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 UBASH3AP57075 661 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 KIF23Q02241 960 aaPredicted RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 SPAG1Q07617 926 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 PSMD2Q13200 908 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 BMS1Q14692 1282 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 WTAPQ15007 396 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 LRRC24Q50LG9 513 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 CAVIN4Q5BKX8 364 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 TEX35Q5T0J7 233 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 AKNAD1Q5T1N1 836 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 CCDC129Q6ZRS4 1044 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 USP50Q70EL3 339 aaPredicted RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 IQCA1Q86XH1 822 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 HOMER1Q86YM7 354 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 NOSTRINQ8IVI9 506 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 AMOTL1Q8IY63 956 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 CCAR2Q8N163 923 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 DPF2Q92785 391 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 SMARCE1Q969G3 411 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 CCDC51Q96ER9 411 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 CHAMP1Q96JM3 812 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 SEC62Q99442 399 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 NOC4LQ9BVI4 516 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 PUS3Q9BZE2 481 aaKnown RBP6.9□□□□□ -1.3
CPSF2-205ENST00000556622 COA1Q9GZY4 146 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF287Q9HBT7 754 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 DISC1Q9NRI5 854 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 FAM105AQ9NUU6 356 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 RMND1Q9NWS8 449 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 GPRC5DQ9NZD1 345 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 TUBE1Q9UJT0 475 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 PHLPP2Q6ZVD8 1323 aa6.9□□□□□ -1.3
CPSF2-205ENST00000556622 NID2Q14112 1375 aa6.9□□□□□ -1.31
CPSF2-205ENST00000556622 SNED1Q8TER0 1413 aa6.9□□□□□ -1.31
CPSF2-205ENST00000556622 FAM95CA0A1B0GW59 222 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC66A2RUB6 948 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 M0R2C6 588 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 SNAP23O00161 211 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 IDH1O75874 414 aaKnown RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 MYL1P05976 194 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 CELA3AP09093 270 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 VIL1P09327 827 aaKnown RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 ZNF865P0CJ78 1059 aaPredicted RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 MCM3P25205 808 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 TRAPPC10P48553 1259 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 TDO2P48775 406 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 USP11P51784 963 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 NDUFA8P51970 172 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 ERVK-24P63145 666 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 ID3Q02535 119 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 TRIM14Q14142 442 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 RESP18Q5W5W9 173 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 TTLL5Q6EMB2 1281 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 FAM173BQ6P4H8 233 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 APOA5Q6Q788 366 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 STOX1Q6ZVD7 989 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 CATIPQ7Z7H3 387 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 DHX40Q8IX18 779 aaKnown RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 AOPEPQ8N6M6 819 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 SPATA5Q8NB90 893 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 MNS1Q8NEH6 495 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 GIMAP7Q8NHV1 300 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 ENOX1Q8TC92 643 aaKnown RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 GRIN3AQ8TCU5 1115 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 FBLIM1Q8WUP2 373 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 CACTINQ8WUQ7 758 aaKnown RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 STAG1Q8WVM7 1258 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 GATA6Q92908 595 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC47Q96A33 483 aaKnown RBP6.89□□□□□ -1.31
CPSF2-205ENST00000556622 IQCDQ96DY2 449 aa6.89□□□□□ -1.31
CPSF2-205ENST00000556622 EDC3Q96F86 508 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms