RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GMCL1Q96IK5 515 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 MBOAT7Q96N66 472 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CSRNP1Q96S65 589 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 DESI2Q9BSY9 194 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 TSGA10Q9BZW7 698 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 MRPL44Q9H9J2 332 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KCNMB3Q9NPA1 279 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 DDX25Q9UHL0 483 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PPP1R9AQ9ULJ8 1098 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SSX2IPQ9Y2D8 614 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 H7C1D1 291 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 KIF2AO00139 706 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PSMD14O00487 310 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 DESP17661 470 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ECE1P42892 770 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CCNHP51946 323 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ERVK-24P63145 666 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SPIRE1Q08AE8 756 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SYCP1Q15431 976 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 GLIS3Q8NEA6 775 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 LARP4BQ92615 738 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 EZH1Q92800 747 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC102AQ96A19 550 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 LENG9Q96B70 501 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 MKL2Q9ULH7 1088 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PCDHA1Q9Y5I3 950 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PHLPP2Q6ZVD8 1323 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 EIF3FO00303 357 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 N4BP3O15049 544 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 VIL1P09327 827 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 OAS2P29728 719 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PDE4DQ08499 809 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PPP2R5CQ13362 524 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 MUM1L1Q5H9M0 696 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ANKRD40Q6AI12 368 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 RSBN1LQ6PCB5 846 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 TNIP2Q8NFZ5 429 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SUN5Q8TC36 379 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CPLX3Q8WVH0 158 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CDK5RAP3Q96JB5 506 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 WDR24Q96S15 920 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SEMA6BQ9H3T3 888 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 STK32BQ9NY57 414 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 STK17AQ9UEE5 414 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CYP3A7-CYP3A51PA0A087WV96 503 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CLRN2A0PK11 232 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 RASSF10A6NK89 507 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PSMA7O14818 248 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 RAD17O75943 681 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ABL1P00519 1130 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 HARSP12081 509 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CYP3A7P24462 503 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 MRPL12P52815 198 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ASIC1P78348 528 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SPAG1Q07617 926 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 NAA25Q14CX7 972 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 MIIPQ5JXC2 388 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 HYIQ5T013 277 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 CNNM4Q6P4Q7 775 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 BTNL9Q6UXG8 535 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ETNPPLQ8TBG4 499 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SNX29Q8TEQ0 813 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 RAD54LQ92698 747 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 KIFC2Q96AC6 838 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 DNAJC19Q96DA6 116 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 SRRTQ9BXP5 876 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ANO3Q9BYT9 981 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 IRX2Q9BZI1 471 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 TTYH3Q9C0H2 523 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 THAP9Q9H5L6 903 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF277Q9NRM2 450 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ABHD10Q9NUJ1 306 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 ARGLU1Q9NWB6 273 aaPredicted RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 PGAP2Q9UHJ9 254 aa5.55□□□□□ -1.52
TMEM260-210ENST00000556422 DDX41Q9UJV9 622 aaKnown RBP5.55□□□□□ -1.52
TMEM260-210ENST00000556422 GOLGA6L10A0A0M3HER8 536 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 LGALS16A8MUM7 142 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TCP10L2B9ZVM9 353 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 MTRF1O75570 445 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 RNASEH2AO75792 299 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 CCNE1P24864 410 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 EEF1GP26641 437 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 PDAP1Q13442 181 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 CENPPQ6IPU0 288 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 SPICE1Q8N0Z3 855 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TTLL6Q8N841 843 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 P2RX5Q93086 422 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 NACC2Q96BF6 587 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 CALML4Q96GE6 196 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 DHTKD1Q96HY7 919 aaPredicted RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 IER2Q9BTL4 223 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 FGFBP2Q9BYJ0 223 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 SLC39A2Q9NP94 309 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ADGRG1Q9Y653 693 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 WDR81Q562E7 1941 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 MYH11P35749 1972 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TMEM110-MUSTN1A8MSY1 372 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 FAM86B1E9PN63 330 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 FAM86B2P0C5J1 330 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 DPEP1P16444 411 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms