RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	ADAM9	Q13443	819 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	R3HDM1	Q15032	1099 aa	Known RBP	13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	RTKN2	Q8IZC4	609 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	ADGRF4	Q8IZF3	695 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	PROM2	Q8N271	834 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	MS4A14	Q96JA4	679 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	MTMR9	Q96QG7	549 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	DDX23	Q9BUQ8	820 aa	Known RBP	13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	MTMR4	Q9NYA4	1195 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	CEP72	Q9P209	647 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029		E9PMD0	336 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	MAN1A1	P33908	653 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	GPR162	Q16538	588 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	QRICH1	Q2TAL8	776 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	ANKRD20A3	Q5VUR7	823 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	GLIS3	Q8NEA6	775 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	PURB	Q96QR8	312 aa	Known RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	MAK16	Q9BXY0	300 aa	Known RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	KDM3A	Q9Y4C1	1321 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	PALM	O75781	387 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	PDE1C	Q14123	709 aa	Predicted RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	CCDC38	Q502W7	563 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	DCUN1D2	Q6PH85	259 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	TMEM179	Q6ZVK1	233 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	MIER3	Q7Z3K6	550 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	FAM133A	Q8N9E0	248 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	TCP11	Q8WWU5	503 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	SREK1	Q8WXA9	508 aa	Known RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	VPS37B	Q9H9H4	285 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	MRPL11	Q9Y3B7	192 aa	Known RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	SFI1	A8K8P3	1242 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	KRIT1	O00522	736 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	SARNP	P82979	210 aa	Known RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	LRCH2	Q5VUJ6	765 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	EMB	Q6PCB8	327 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	KCNK18	Q7Z418	384 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	VTI1A	Q96AJ9	217 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	RILP	Q96NA2	401 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	RIOX1	Q9H6W3	641 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	EPB41L5	Q9HCM4	733 aa		13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	RBM12	Q9NTZ6	932 aa	Known RBP	13.32	□□□□□ -0.28
TMPO-212	ENST00000556029	HEXIM1	O94992	359 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	PRLR	P16471	622 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	ATP2A2	P16615	1042 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	EIF2AK2	P19525	551 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	HNRNPH3	P31942	346 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	STX2	P32856	288 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	ARHGEF16	Q5VV41	709 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	GADL1	Q6ZQY3	521 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	RNF10	Q8N5U6	811 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	CCDC110	Q8TBZ0	833 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	KRT12	Q99456	494 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	ANO3	Q9BYT9	981 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	CPSF2	Q9P2I0	782 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	ADAMTS1	Q9UHI8	967 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	PLA2G4B	P0C869	781 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	EEPD1	Q7L9B9	569 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	EDEM3	Q9BZQ6	932 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	MYH14	Q7Z406	1995 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	ABCB11	O95342	1321 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	SSU72P8	A0A1W2PR75	194 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	AEN	Q8WTP8	325 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	EMILIN3	Q9NT22	766 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	NFU1	Q9UMS0	254 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	ZBTB5	O15062	677 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	BAG2	O95816	211 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	MKRN3	Q13064	507 aa	Known RBP	13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	COBLL1	Q53SF7	1204 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	CCDC127	Q96BQ5	260 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	MTMR8	Q96EF0	704 aa		13.31	□□□□□ -0.28
TMPO-212	ENST00000556029	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	ESYT3	A0FGR9	886 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	RGL2	O15211	777 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	NLRX1	Q86UT6	975 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	LMNTD2	Q8IXW0	634 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	RPUSD2	Q8IZ73	545 aa	Known RBP	13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	CSAD	Q9Y600	493 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	STAT3	P40763	770 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	SLC15A2	Q16348	729 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	ALS2CL	Q60I27	953 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	LRRC55	Q6ZSA7	311 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	SULF1	Q8IWU6	871 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	CACNA2D3	Q8IZS8	1091 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	PIGO	Q8TEQ8	1089 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	JMJD4	Q9H9V9	463 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	RNF14	Q9UBS8	474 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	SSX2IP	Q9Y2D8	614 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	CD2AP	Q9Y5K6	639 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	POTEB3	A0JP26	581 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	POTEC	B2RU33	542 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	PRPF6	O94906	941 aa	Known RBP	13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	GCFC2	P16383	781 aa	Known RBP	13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	DPEP1	P16444	411 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	HOXA7	P31268	230 aa	Predicted RBP	13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	WDR44	Q5JSH3	913 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	DENND2C	Q68D51	928 aa		13.3	□□□□□ -0.28
TMPO-212	ENST00000556029	POTEB	Q6S5H4	581 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms