RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CTNND2Q9UQB3 1225 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 COL4A3BPQ9Y5P4 624 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 PTCH2Q9Y6C5 1203 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 ZBTB42B2RXF5 422 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 H3BRB1 525 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 SEPT4O43236 478 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 DGAT1O75907 488 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 PGK1P00558 417 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 HMGCRP04035 888 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 HOXD8P13378 290 aaPredicted RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 NMT1P30419 496 aaKnown RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 PMS1P54277 932 aaKnown RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 PSMD2Q13200 908 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 NCAPHQ15003 741 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 TMEM143Q96AN5 459 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 TUT1Q9H6E5 874 aaKnown RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
SRP54-208ENST00000555557 ODF2LQ9ULJ1 636 aa11.3□□□□□ -0.6
SRP54-208ENST00000555557 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 CAPN15O75808 1086 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 C6orf222P0C671 652 aaPredicted RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 MYBP10242 640 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 MRE11P49959 708 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 SLC26A2P50443 739 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 ZNF131P52739 623 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 IGBP1P78318 339 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 EMC2Q15006 297 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 ODR4Q5SWX8 454 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 FAM167AQ96KS9 214 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 BPIFA3Q9BQP9 254 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 ATP6V0A4Q9HBG4 840 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 Q9Y3F1 56 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 MYH9P35579 1960 aaKnown RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 HBP1O60381 514 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 INHAP05111 366 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 MYL3P08590 195 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 RARBP10826 455 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 INSRRP14616 1297 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 PAK1Q13153 545 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 DRP2Q13474 957 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 ZC2HC1CQ53FD0 456 aaPredicted RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 NELFCDQ8IXH7 590 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 SCFD1Q8WVM8 642 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 BSNDQ8WZ55 320 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 KAT2BQ92831 832 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 SUGCTQ9HAC7 445 aa11.29□□□□□ -0.6
SRP54-208ENST00000555557 ZNF215Q9UL58 517 aaPredicted RBP11.29□□□□□ -0.6
SRP54-208ENST00000555557 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 GOLGA6L19H0YKK7 550 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 PRPF6O94906 941 aaKnown RBP11.28□□□□□ -0.6
SRP54-208ENST00000555557 GCNT3O95395 438 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 PLS3P13797 630 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 GAP43P17677 238 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 GRK4P32298 578 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 CPT1AP50416 773 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 PEX3P56589 373 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 MYL5Q02045 173 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 KCNA1Q09470 495 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 STIM1Q13586 685 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 GNASQ5JWF2 1037 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 MAP3K21Q5TCX8 1036 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 FAM178BQ8IXR5 827 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 MYOCDQ8IZQ8 938 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 LRRC71Q8N4P6 559 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
SRP54-208ENST00000555557 SLC7A3Q8WY07 619 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 EEF2KMTQ96G04 330 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 DRC1Q96MC2 740 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 HSD3B7Q9H2F3 369 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 FANCLQ9NW38 375 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
SRP54-208ENST00000555557 CCDC169A6NNP5 214 aa11.27□□□□□ -0.6
SRP54-208ENST00000555557 SMTNL1A8MU46 457 aa11.27□□□□□ -0.6
SRP54-208ENST00000555557 PSMA7O14818 248 aa11.27□□□□□ -0.6
SRP54-208ENST00000555557 AP5Z1O43299 807 aa11.27□□□□□ -0.6
SRP54-208ENST00000555557 MAFO75444 373 aaPredicted RBP11.27□□□□□ -0.6
SRP54-208ENST00000555557 MYCP01106 439 aaPredicted RBP11.27□□□□□ -0.6
SRP54-208ENST00000555557 LBX1P52954 281 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms