RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	SLC9A2	Q9UBY0	812 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	MTUS1	Q9ULD2	1270 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	NLRC5	Q86WI3	1866 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	RALGAPA2	Q2PPJ7	1873 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382		H3BQ06	376 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	CUTA	O60888	179 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	ATP2B1	P20020	1258 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	SSTR3	P32745	418 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	KCNJ6	P48051	423 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	SLC26A2	P50443	739 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	LY6K	Q17RY6	165 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	PUS10	Q3MIT2	529 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	BRDT	Q58F21	947 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	FAM47C	Q5HY64	1035 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	ADAL	Q6DHV7	355 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	LRRC8D	Q7L1W4	858 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	DHX37	Q8IY37	1157 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	RETREG2	Q8NC44	543 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	PRSS33	Q8NF86	280 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	LEO1	Q8WVC0	666 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	SEPT1	Q8WYJ6	367 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	MRPL38	Q96DV4	380 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	TFIP11	Q9UBB9	837 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	PRKAG3	Q9UGI9	489 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	TCEAL9	Q9UHQ7	104 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	FBXO2	Q9UK22	296 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	EMSY	Q7Z589	1322 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	KAT6A	Q92794	2004 aa		10.79	□□□□□ -0.68
PRKCH-215	ENST00000555382	DNAH14	Q0VDD8	3507 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382		A0A1W2PQ27	194 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382		A0A1W2PQ64	194 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382		A0A1W2PQD8	194 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	WDR64	B1ANS9	1081 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	MARCH6	O60337	910 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	LGR5	O75473	907 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	LYPLA2	O95372	231 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	GGPS1	O95749	300 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	LINC00271	P0C7V0	271 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	CKB	P12277	381 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	IRS1	P35568	1242 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	LTBR	P36941	435 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	NBR1	Q14596	966 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	STK38	Q15208	465 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	EPHA7	Q15375	998 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	PTGIS	Q16647	500 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	HYI	Q5T013	277 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	ABHD15	Q6UXT9	468 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	CYFIP1	Q7L576	1253 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	PLPPR4	Q7Z2D5	763 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	ADHFE1	Q8IWW8	467 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	PABPC5	Q96DU9	382 aa	Known RBP	10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	SPATA32	Q96LK8	384 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	GBP4	Q96PP9	640 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	UIMC1	Q96RL1	719 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	GPR20	Q99678	358 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	HSD17B14	Q9BPX1	270 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	CCSER1	Q9C0I3	900 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	MLXIP	Q9HAP2	919 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	PCDHA10	Q9Y5I2	948 aa		10.78	□□□□□ -0.68
PRKCH-215	ENST00000555382	RIF1	Q5UIP0	2472 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	FAM237A	A0A1B0GTK4	181 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	DKC1	O60832	514 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	PARN	O95453	639 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	CCNE2	O96020	404 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	PSAP	P07602	524 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	XRCC6	P12956	609 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	CMA1	P23946	247 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	RPA1	P27694	616 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	TXK	P42681	527 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	ACTR2	P61160	394 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	HIC1	Q14526	733 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	IL17A	Q16552	155 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	DGKD	Q16760	1214 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	CTC1	Q2NKJ3	1217 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	HAUS3	Q68CZ6	603 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	FBXO22	Q8NEZ5	403 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	ERMN	Q8TAM6	284 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	SPATA33	Q96N06	139 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	PYM1	Q9BRP8	204 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	TUFT1	Q9NNX1	390 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	DISC1	Q9NRI5	854 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	GTF2IRD1	Q9UHL9	959 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	GVINP1	Q7Z2Y8	2422 aa		10.77	□□□□□ -0.69
PRKCH-215	ENST00000555382	DMXL1	Q9Y485	3027 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	PLXNA3	P51805	1871 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	GSTTP1	A0A1W2PQM5	241 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	HAS3	O00219	553 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	NOP56	O00567	594 aa	Known RBP	10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	EFCAB14	O75071	495 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	P4HB	P07237	508 aa	Known RBP	10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	MMP3	P08254	477 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	TEC	P42680	631 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	HSDL1	Q3SXM5	330 aa		10.76	□□□□□ -0.69
PRKCH-215	ENST00000555382	EPC2	Q52LR7	807 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms