RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CALML6Q8TD86 181 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 CACTINQ8WUQ7 758 aaKnown RBP7.59□□□□□ -1.19
VRK1-203ENST00000555067 KIAA1683Q9H0B3 1180 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 TNFRSF18Q9Y5U5 241 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 B3GALT1Q9Y5Z6 326 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 MATN2O00339 956 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 MAFO75444 373 aaPredicted RBP7.58□□□□□ -1.2
VRK1-203ENST00000555067 C1SP09871 688 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 ACO1P21399 889 aaKnown RBP7.58□□□□□ -1.2
VRK1-203ENST00000555067 CD83Q01151 205 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 HNRNPA0Q13151 305 aaKnown RBP7.58□□□□□ -1.2
VRK1-203ENST00000555067 DUSP8Q13202 625 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 SF3A1Q15459 793 aaKnown RBP7.58□□□□□ -1.2
VRK1-203ENST00000555067 TRIM68Q6AZZ1 485 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 GRAMD4Q6IC98 578 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 LRSAM1Q6UWE0 723 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 MAMDC4Q6UXC1 1216 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 OVCH1Q7RTY7 1134 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 BRAPQ7Z569 592 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 LDLRAD3Q86YD5 345 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 RTKN2Q8IZC4 609 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 HIPK4Q8NE63 616 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 DLG3Q92796 817 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 GBP4Q96PP9 640 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 OR14A2Q96R54 314 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 OR10A2Q9H208 303 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 C12orf65Q9H3J6 166 aaKnown RBP7.58□□□□□ -1.2
VRK1-203ENST00000555067 CDC42EP3Q9UKI2 254 aa7.58□□□□□ -1.2
VRK1-203ENST00000555067 MOGSQ13724 837 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 PCOLCEQ15113 449 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 TBR1Q16650 682 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 TM4SF20Q53R12 229 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 C2orf27AQ580R0 203 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 CFHR4Q92496 578 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 SCLYQ96I15 445 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 PLA2G12BQ9BX93 195 aa7.57□□□□□ -1.2
VRK1-203ENST00000555067 TCRBV16S1A1N1A0A5B0 115 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 PRAMEF22A3QJZ6 481 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 MRE11P49959 708 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 MAP3K12Q12852 859 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
VRK1-203ENST00000555067 FSTL4Q6MZW2 842 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 FILIP1Q7Z7B0 1213 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 C1orf210Q8IVY1 113 aa7.56□□□□□ -1.2
VRK1-203ENST00000555067 NEU4Q8WWR8 484 aaPredicted RBP7.56□□□□□ -1.2
VRK1-203ENST00000555067 RASSF10A6NK89 507 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 APEX1P27695 318 aaKnown RBP7.55□□□□□ -1.2
VRK1-203ENST00000555067 IRF9Q00978 393 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 TMEM177Q53S58 311 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 FNDC7Q5VTL7 733 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 PCSK4Q6UW60 755 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 DNAJC10Q8IXB1 793 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 C2orf69Q8N8R5 385 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 BOCQ9BWV1 1114 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 NELFAQ9H3P2 528 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
VRK1-203ENST00000555067 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
VRK1-203ENST00000555067 GOLGA6L22H0YM25 854 aa7.54□□□□□ -1.2
VRK1-203ENST00000555067 TMEM132BQ14DG7 1078 aa7.54□□□□□ -1.2
VRK1-203ENST00000555067 OTOP1Q7RTM1 612 aa7.54□□□□□ -1.2
VRK1-203ENST00000555067 IGSF22Q8N9C0 903 aa7.54□□□□□ -1.2
VRK1-203ENST00000555067 WDR26Q9H7D7 661 aa7.54□□□□□ -1.2
VRK1-203ENST00000555067 TRIM39Q9HCM9 518 aa7.54□□□□□ -1.2
VRK1-203ENST00000555067 PMS2P1A4D2B8 440 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 KCNA6P17658 529 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 ACRV1P26436 265 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 CATSPEREQ5SY80 951 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 CC2D1AQ6P1N0 951 aaPredicted RBP7.53□□□□□ -1.2
VRK1-203ENST00000555067 GIMAP6Q6P9H5 292 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 ABHD17CQ6PCB6 329 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 FGD2Q7Z6J4 655 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 PMFBP1Q8TBY8 1022 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 E2F7Q96AV8 911 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 PLEKHG4BQ96PX9 1271 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 FOXB1Q99853 325 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 FAM184BQ9ULE4 1060 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 VWA7Q9Y334 891 aa7.53□□□□□ -1.2
VRK1-203ENST00000555067 B4E1Z4 1266 aa7.52□□□□□ -1.21
VRK1-203ENST00000555067 PLD2O14939 933 aa7.52□□□□□ -1.21
VRK1-203ENST00000555067 FNTBP49356 437 aa7.52□□□□□ -1.21
VRK1-203ENST00000555067 STAT5BP51692 787 aa7.52□□□□□ -1.21
VRK1-203ENST00000555067 ALDH6A1Q02252 535 aaKnown RBP7.52□□□□□ -1.21
VRK1-203ENST00000555067 HGFACQ04756 655 aa7.52□□□□□ -1.21
VRK1-203ENST00000555067 DDX53Q86TM3 631 aaKnown RBP7.52□□□□□ -1.21
VRK1-203ENST00000555067 LARP4BQ92615 738 aaKnown RBP7.52□□□□□ -1.21
VRK1-203ENST00000555067 LPPQ93052 612 aa7.52□□□□□ -1.21
VRK1-203ENST00000555067 SLC26A4O43511 780 aa7.51□□□□□ -1.21
VRK1-203ENST00000555067 RTN4RL1Q86UN2 441 aaPredicted RBP7.51□□□□□ -1.21
VRK1-203ENST00000555067 OR14K1Q8NGZ2 314 aa7.51□□□□□ -1.21
VRK1-203ENST00000555067 AGAP2Q99490 1192 aa7.51□□□□□ -1.21
VRK1-203ENST00000555067 PLA2G3Q9NZ20 509 aa7.51□□□□□ -1.21
VRK1-203ENST00000555067 ZBTB48P10074 688 aaPredicted RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 MSX2P35548 267 aaPredicted RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 SESN2P58004 480 aaPredicted RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 HHEXQ03014 270 aa7.5□□□□□ -1.21
VRK1-203ENST00000555067 FOXL1Q12952 345 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms