RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 NHLH1Q02575 133 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 RESTQ13127 1097 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
TMEM260-206ENST00000555046 SHHQ15465 462 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 MARCH8Q5T0T0 291 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 PSRC1Q6PGN9 363 aaPredicted RBP11.84□□□□□ -0.51
TMEM260-206ENST00000555046 LRRC8DQ7L1W4 858 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 SLC7A3Q8WY07 619 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 LXNQ9BS40 222 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMEM260-206ENST00000555046 IL23AQ9NPF7 189 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
TMEM260-206ENST00000555046 SQORQ9Y6N5 450 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 ZNF318Q5VUA4 2279 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 ZNF862O60290 1169 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 EFCAB14O75071 495 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 CSF2RAP15509 400 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 ITGB8P26012 769 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 LONP1P36776 959 aaKnown RBP11.83□□□□□ -0.52
TMEM260-206ENST00000555046 NUCB2P80303 420 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 CYP4A11Q02928 519 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 CTTNQ14247 550 aaKnown RBP11.83□□□□□ -0.52
TMEM260-206ENST00000555046 NBR1Q14596 966 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 TARBP2Q15633 366 aaKnown RBP11.83□□□□□ -0.52
TMEM260-206ENST00000555046 TRIM71Q2Q1W2 868 aaKnown RBP11.83□□□□□ -0.52
TMEM260-206ENST00000555046 FAM26DQ5JW98 314 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 ZNF618Q5T7W0 954 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 EFCAB12Q6NXP0 572 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 CATSPER3Q86XQ3 398 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 IGSF22Q8N9C0 903 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 PPP1R13LQ8WUF5 828 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 DNAJB3Q8WWF6 145 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 CTAGE1Q96RT6 745 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 SUGCTQ9HAC7 445 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 DNM3Q9UQ16 869 aa11.83□□□□□ -0.52
TMEM260-206ENST00000555046 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-206ENST00000555046 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 POTEMA6NI47 508 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 ASAP2O43150 1006 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 MAFO75444 373 aaPredicted RBP11.82□□□□□ -0.52
TMEM260-206ENST00000555046 F13A1P00488 732 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 CCT6AP40227 531 aaKnown RBP11.82□□□□□ -0.52
TMEM260-206ENST00000555046 UBA7P41226 1012 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 HIC1Q14526 733 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 SLC39A14Q15043 492 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 UGCGQ16739 394 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 XKR9Q5GH70 373 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 ANO5Q75V66 913 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 KIAA0319LQ8IZA0 1049 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 TCP11Q8WWU5 503 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 DHX38Q92620 1227 aaKnown RBP11.82□□□□□ -0.52
TMEM260-206ENST00000555046 APBB2Q92870 758 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 CALML4Q96GE6 196 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 CDK5RAP3Q96JB5 506 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
TMEM260-206ENST00000555046 KCNG1Q9UIX4 513 aa11.82□□□□□ -0.52
TMEM260-206ENST00000555046 DBR1Q9UK59 544 aaKnown RBP11.82□□□□□ -0.52
TMEM260-206ENST00000555046 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 ABHD14A-ACY1A0A1B0GW23 586 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 ZBTB42B2RXF5 422 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 GPR37L1O60883 481 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 DGAT1O75907 488 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 STBD1O95210 358 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 C22orf31O95567 290 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 SPATA31C1P0DKV0 1188 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 TXLNAP40222 546 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 POLGP54098 1239 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-206ENST00000555046 MRPS6P82932 125 aaKnown RBP11.81□□□□□ -0.52
TMEM260-206ENST00000555046 IKBKEQ14164 716 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 RUFY4Q6ZNE9 571 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 SNX29Q8TEQ0 813 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 SEPT8Q92599 483 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 SCLYQ96I15 445 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 INO80BQ9C086 356 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-206ENST00000555046 FAM49AQ9H0Q0 323 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-206ENST00000555046 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 SRPRBQ9Y5M8 271 aaKnown RBP11.81□□□□□ -0.52
TMEM260-206ENST00000555046 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
TMEM260-206ENST00000555046 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 GPR182O15218 404 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 BAIAP3O94812 1187 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 YEATS4O95619 227 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 BRD1O95696 1058 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 CHRNA1P02708 482 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 CXCL10P02778 98 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms