RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 EDARQ9UNE0 448 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 SIT1Q9Y3P8 196 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 NUMBLQ9Y6R0 609 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 TPP1O14773 563 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 PSPNO60542 156 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 CTNND1O60716 968 aaKnown RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 PRPF6O94906 941 aaKnown RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 MPIG6BO95866 241 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 ZBED1O96006 694 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 HPXP02790 462 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 LPLP06858 475 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 PFKMP08237 780 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 DBHP09172 617 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 IFIT2P09913 472 aaKnown RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 SLC5A3P53794 718 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 CYP4F8P98187 520 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 TRIM25Q14258 630 aaKnown RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 ANO4Q32M45 955 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 PAN2Q504Q3 1202 aaKnown RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 PRSS36Q5K4E3 855 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 TTC38Q5R3I4 469 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 MBNL2Q5VZF2 373 aaKnown RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 OVCH2Q7RTZ1 564 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 SRGAP1Q7Z6B7 1085 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 THEMISQ8N1K5 641 aaPredicted RBP4.93□□□□□ -1.62
TDP1-207ENST00000553617 OXR1Q8N573 874 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 ZBTB34Q8NCN2 500 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 ARRDC4Q8NCT1 418 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 TSPEARQ8WU66 669 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 AUTS2Q8WXX7 1259 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 SHISA4Q96DD7 197 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 SLC2A13Q96QE2 648 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 FOXB1Q99853 325 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 MYL10Q9BUA6 226 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 AP5M1Q9H0R1 490 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 KCTD10Q9H3F6 313 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 C19orf73Q9NVV2 129 aa4.93□□□□□ -1.62
TDP1-207ENST00000553617 PMM2O15305 246 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 PDCP20941 246 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 SERPINB3P29508 390 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 HK2P52789 917 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 GJA9P57773 515 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 KIF23Q02241 960 aaPredicted RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 ALDH6A1Q02252 535 aaKnown RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 GRIN1Q05586 938 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 DBPQ10586 325 aaPredicted RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 SAFB2Q14151 953 aaKnown RBP eCLIP4.92□□□□□ -1.62
TDP1-207ENST00000553617 DHX8Q14562 1220 aaKnown RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 TIGD5Q53EQ6 642 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 C10orf62Q5T681 223 aaPredicted RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 BICRALQ6AI39 1079 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 KIAA1841Q6NSI8 718 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 ZNF574Q6ZN55 896 aaPredicted RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 USP45Q70EL2 814 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 MILR1Q7Z6M3 343 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 C11orf96Q7Z7L8 435 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 MORC1Q86VD1 984 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 GJA10Q969M2 543 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 FERMT2Q96AC1 680 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 E2F7Q96AV8 911 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 MVB12AQ96EY5 273 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 ELAC2Q9BQ52 826 aaKnown RBP4.92□□□□□ -1.62
TDP1-207ENST00000553617 HSPBP1Q9NZL4 362 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 BCCIPQ9P287 314 aaKnown RBP eCLIP4.92□□□□□ -1.62
TDP1-207ENST00000553617 PHTF1Q9UMS5 762 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 FAM50BQ9Y247 325 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 SLC5A6Q9Y289 635 aa4.92□□□□□ -1.62
TDP1-207ENST00000553617 H3BML4 177 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 TUSC2O75896 110 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 SLC5A1P13866 664 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 PNLIPP16233 465 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 EDNRBP24530 442 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 PDE6BP35913 854 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 LGALS4P56470 323 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 TIGD7Q6NT04 549 aaPredicted RBP4.91□□□□□ -1.62
TDP1-207ENST00000553617 UNQ6494/PRO21346Q6UXR6 183 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 NFXL1Q6ZNB6 911 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 TOGARAM2Q6ZUX3 1019 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 HIPK4Q8NE63 616 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 ERCC4Q92889 916 aaPredicted RBP4.91□□□□□ -1.62
TDP1-207ENST00000553617 C1GALT1C1Q96EU7 318 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 PEX11GQ96HA9 241 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 CCDC120Q96HB5 630 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 TUBGCP5Q96RT8 1024 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 MAP3K14Q99558 947 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 NAA15Q9BXJ9 866 aaKnown RBP4.91□□□□□ -1.62
TDP1-207ENST00000553617 TMEM60Q9H2L4 133 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 IFT122Q9HBG6 1241 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 KLHL11Q9NVR0 708 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 DPP7Q9UHL4 492 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 NUDT5Q9UKK9 219 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 DENND2AQ9ULE3 1009 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 WASF3Q9UPY6 502 aa4.91□□□□□ -1.62
TDP1-207ENST00000553617 A0A1W2PQJ5 194 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PRAMEF22A3QJZ6 481 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 FAM227AF5H4B4 570 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 CYBBP04839 570 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 CELA3BP08861 270 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms