RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PLEKHG1Q9ULL1 1385 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 NINLQ9Y2I6 1382 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 ADGRB3O60242 1522 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 SPHKAPQ2M3C7 1700 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 FAM90A27PA6NNH2 459 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 RASGRP1O95267 797 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 CYP1A1P04798 512 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-218ENST00000553309 ZNF28P17035 718 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 PFKPQ01813 784 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 EZH2Q15910 746 aaKnown RBP7.05□□□□□ -1.28
ATXN3-218ENST00000553309 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 UBXN11Q5T124 520 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 ZFYVE27Q5T4F4 411 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 DTX3Q8N9I9 347 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 WRNIP1Q96S55 665 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 RIC8BQ9NVN3 520 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 ATP23Q9Y6H3 246 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 DUSP10Q9Y6W6 482 aa7.05□□□□□ -1.28
ATXN3-218ENST00000553309 MROH6A6NGR9 719 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 MAN2B1O00754 1011 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 GLRBP48167 497 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 LACTBP83111 547 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-218ENST00000553309 CD276Q5ZPR3 534 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 TRMT10BQ6PF06 316 aaKnown RBP7.04□□□□□ -1.28
ATXN3-218ENST00000553309 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 TMEM168Q9H0V1 697 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
ATXN3-218ENST00000553309 MYOM2P54296 1465 aa7.04□□□□□ -1.28
ATXN3-218ENST00000553309 DCCP43146 1447 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 ARHGAP31Q2M1Z3 1444 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 PTPRUQ92729 1446 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 B8ZZF3 427 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 KCNK3O14649 394 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 KCNQ2O43526 872 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 SYN1P17600 705 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
ATXN3-218ENST00000553309 CNR2P34972 360 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 SQSTM1Q13501 440 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 SKIDA1Q1XH10 827 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 ERICH6BQ5W0A0 696 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 BRAPQ7Z569 592 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 FGD2Q7Z6J4 655 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 UNC5CLQ8IV45 518 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 SH3TC2Q8TF17 1288 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 LCORQ96JN0 433 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-218ENST00000553309 ARHGAP20Q9P2F6 1191 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 COQ6Q9Y2Z9 468 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 TBX22Q9Y458 520 aa7.03□□□□□ -1.28
ATXN3-218ENST00000553309 ZFYVE9O95405 1425 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 ADAMTS13Q76LX8 1427 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 RIMS2Q9UQ26 1411 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 TRPM2O94759 1503 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-218ENST00000553309 TCRBV16S1A1N1A0A5B0 115 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 PLD2O14939 933 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 FBXO21O94952 628 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 DBPQ10586 325 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-218ENST00000553309 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 ZCCHC14Q8WYQ9 949 aaKnown RBP7.02□□□□□ -1.29
ATXN3-218ENST00000553309 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
ATXN3-218ENST00000553309 PIF1Q9H611 641 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 KANSL2Q9H9L4 492 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 SPON1Q9HCB6 807 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 SLC39A2Q9NP94 309 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 MTUS2Q5JR59 1369 aa7.02□□□□□ -1.29
ATXN3-218ENST00000553309 EIF2AK4Q9P2K8 1649 aaKnown RBP7.01□□□□□ -1.29
ATXN3-218ENST00000553309 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 ZNF839A8K0R7 811 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 PRRG2O14669 202 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 GJA4P35212 333 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 PLP2Q04941 152 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 FIGNQ5HY92 759 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 LGI4Q8N135 537 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 CISD2Q8N5K1 135 aaKnown RBP7.01□□□□□ -1.29
ATXN3-218ENST00000553309 STPG3Q8N7X2 389 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 CLUHP3Q96NS8 147 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 ORAI2Q96SN7 254 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 TRIM39Q9HCM9 518 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 ZFP69BQ9UJL9 534 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 ZDHHC9Q9Y397 364 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 RGPD1P0DJD0 1748 aa7.01□□□□□ -1.29
ATXN3-218ENST00000553309 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.01□□□□□ -1.29
ATXN3-218ENST00000553309 COL22A1Q8NFW1 1626 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-218ENST00000553309 C1orf167Q5SNV9 1468 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 FYCO1Q9BQS8 1478 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 CLASP2O75122 1294 aaKnown RBP7□□□□□ -1.29
ATXN3-218ENST00000553309 TSPY4P0CV99 314 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 TSPY10P0CW01 314 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
ATXN3-218ENST00000553309 ABHD17CQ6PCB6 329 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 BORAQ6PGQ7 559 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 OVCH1Q7RTY7 1134 aa7□□□□□ -1.29
ATXN3-218ENST00000553309 IGSF22Q8N9C0 903 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms